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BaseInfo

ncRNA ID novel_bra_miR325
Species Brassica rapa
Class miRNA
Genome position ChrA1:1484721-1484937 [+]
Reference genome Brapa_1.0
Source SRR1592476
Length 24
Mature sequence(if miRNA) 194 - AGAGUGUGAUUGGAGAUGGUCUAA - 217
Stem-loop(if miRNA) --   G         AG         UU           A     A                                                              
  AGA CAUCUCCAA  GCACUCUAU  UUUCCUCUAUA UUUAC CUAAAAUAGAGUAACUCUAUUAUAGAGUUGAAUUUGCUCCAAUGGUUCACUCUAUAAUAGAGU
  ||| |||||||||  |||||||||  ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||U
  UCU GUAGAGGUU  UGUGAGAUA  AAAGGAGAUAU AAGUG GAUUUUAUCUCAUUGAGAUAAUAUCUCAACUUAAACGAGGUUACCAAGUGAGAUAUUAUCUCA
AA   G         AG         UU           A     A                                                              
Stem-loop sequence AGAGCAUCUCCAAAGGCACUCUAUUUUUUCCUCUAUAAUUUACACUAAAAUAGAGUAACUCUAUUAUAGAGUUGAAUUUGCUCCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUUAUAGAGUGAACCAUUGGAGCAAAUUCAACUCUAUAAUAGAGUUACUCUAUUUUAGAGUGAAAUAUAGAGGAAAUUAUAGAGUGUGAUUGGAGAUGGUCUAA