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BaseInfo

ncRNA ID	ath-miRf10744-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - GACAAGGAAGCAUAGCUUCA - NA
Stem-loop(if miRNA)	--     A               G                     ---GA       --- UU AA AGGAAUA  UGACA GGAAGCAUAGCUUCA GUCCUUCAAUGGAGGUGUGGU     AACAGAG   U  C  G |||||||  ||||| ||||||||||||||| |||||||||||||||||||||     |||||||   |  | UCUUUAU  ACUGU CCUUCGUAUCGAGGU UAGGAAGUUACCUCCACACCA     UUGUUUU   G  G  A        AA     G               A                     GGAAG       UAU GG GG
Stem-loop sequence	AGGAAUAUGACAAGGAAGCAUAGCUUCAGGUCCUUCAAUGGAGGUGUGGUGAAACAGAGUUUCAAGAGGGGGGUAUUUUUGUUGAAGGACCACACCUCCAUUGAAGGAUAUGGAGCUAUGCUUCCGUGUCAAAUAUUUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001333455.1	ncRNA:20   ACUUCGAUACGAAGGAACAG   1   |||||||||||||||||||| targets:12   UGAAGCUAUGCUUCCUUGUC   31 Target Full Sequence	0.0	Arabidopsis thaliana aminotransferase-like, mobile domain protein partial mRNA	aminotransferase-like, mobile domain protein(AT1G50750)	coding protein	psRNATarget
NM_121888.3	ncRNA:20   ACUUCGAUACGAAGGAACAG   1   |||||*|||||||||||||= targets:530   UGAAGGUAUGCUUCCUUGUU   549 Target Full Sequence	2.0	Arabidopsis thaliana squamosa promoter binding protein-like 7 (SPL7), mRNA	squamosa promoter binding protein-like 7(SPL7)	coding protein	psRNATarget
AY063815.1	ncRNA:20   ACUUCGAUACGAAGGAACAG   1   |||||*|||||||||||||= targets:403   UGAAGGUAUGCUUCCUUGUU   422 Target Full Sequence	2.0	Arabidopsis thaliana putative squamosa promoter binding protein 7 (At5g18830) mRNA, complete cds	NA	coding protein	psRNATarget
NM_180519.1	ncRNA:20   ACUUCGAUACGAAGGAACAG   1   |||||*|||||||||||||= targets:403   UGAAGGUAUGCUUCCUUGUU   422 Target Full Sequence	2.0	Arabidopsis thaliana squamosa promoter binding protein-like 7 (SPL7), mRNA	squamosa promoter binding protein-like 7(SPL7)	coding protein	psRNATarget
BX831047.1	ncRNA:20   ACUUCGAUACGAAGGAACAG   1   |||||*|||||||||||||= targets:388   UGAAGGUAUGCUUCCUUGUU   407 Target Full Sequence	2.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS53ZB10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AF367355.1	ncRNA:20   ACUUCGAUACGAAGGAACAG   1   |||||*|||||||||||||= targets:371   UGAAGGUAUGCUUCCUUGUU   390 Target Full Sequence	2.0	Arabidopsis thaliana AT5g18830/F17K4_80 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001203404.1	ncRNA:20   ACUUCGAUACGAAGGAACAG   1   |||||*|||||||||||||= targets:435   UGAAGGUAUGCUUCCUUGUU   454 Target Full Sequence	2.0	Arabidopsis thaliana squamosa promoter binding protein-like 7 (SPL7), mRNA	squamosa promoter binding protein-like 7(SPL7)	coding protein	psRNATarget
AJ011612.1	ncRNA:20   ACUUCGAUACGAAGGAACAG   1   |||||*|||||||||||||= targets:329   UGAAGGUAUGCUUCCUUGUU   348 Target Full Sequence	2.0	Arabidopsis thaliana (ecotype Columbia) mRNA for squamosa promoter binding protein-like 7	NA	coding protein	psRNATarget
AY078050.1	ncRNA:20   ACUUCGAUACGAAGGAACAG   1   |||||*|||||||||||||= targets:273   UGAAGGUAUGCUUCCUUGUU   292 Target Full Sequence	2.0	Arabidopsis thaliana AT5g18830/F17K4_80 mRNA, complete cds	NA	coding protein	psRNATarget
AJ011611.1	ncRNA:20   ACUUCGAUACGAAGGAACAG   1   |||||*|||||||||||||= targets:362   UGAAGGUAUGCUUCCUUGUU   381 Target Full Sequence	2.0	Arabidopsis thaliana (ecotype Landsberg erecta) mRNA for squamosa promoter binding protein-like 7, partial	NA	coding protein	psRNATarget