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BaseInfo

ncRNA ID novel_bra_miR315
Species Brassica rapa
Class miRNA
Genome position ChrA9:20354648-20354782 [+]
Reference genome Brapa_1.0
Source SRR1592476;SRR1592477
Length 24
Mature sequence(if miRNA) 112 - AUUGGUUGAAAUGUGGUUAGAUGU - 135
Stem-loop(if miRNA) --C    U   UUU        UU   A      -------AAU     UUAUCAAAAUAAAUGUCAUUUUA
   UCUA CCG   CAUUUUAG  AGU GAGAAA          UUUUG                       U
   |||| |||   ||||||||  ||| ||||||          |||||                       A
   AGAU GGU   GUAAAGUU  UUA CUUUUU          AUAUU                       A
UGU    U   ---        GG   A      AUCUAACCAU     UCAGUUAUUUAAAUUGUAAUUUU
Stem-loop sequence CUCUAUCCGUUUCAUUUUAGUUAGUAGAGAAAAAUUUUUGUUAUCAAAAUAAAUGUCAUUUUAUAAUUUUAAUGUUAAAUUUAUUGACUUUAUAUACCAAUCUAUUUUUCAAUUGGUUGAAAUGUGGUUAGAUGU