ncRNA ID | novel_bra_miR315 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA9:20354648-20354782 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1592476;SRR1592477 |
Length | 24 |
Mature sequence(if miRNA) | 112 - AUUGGUUGAAAUGUGGUUAGAUGU - 135 |
Stem-loop(if miRNA) |
--C    U   UUU        UU   A      -------AAU     UUAUCAAAAUAAAUGUCAUUUUA    UCUA CCG   CAUUUUAG  AGU GAGAAA          UUUUG                       U    |||| |||   ||||||||  ||| ||||||          |||||                       A    AGAU GGU   GUAAAGUU  UUA CUUUUU          AUAUU                       A UGU    U   ---        GG   A      AUCUAACCAU     UCAGUUAUUUAAAUUGUAAUUUU |
Stem-loop sequence | CUCUAUCCGUUUCAUUUUAGUUAGUAGAGAAAAAUUUUUGUUAUCAAAAUAAAUGUCAUUUUAUAAUUUUAAUGUUAAAUUUAUUGACUUUAUAUACCAAUCUAUUUUUCAAUUGGUUGAAAUGUGGUUAGAUGU |