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BaseInfo

ncRNA ID novel_bra_miR306
Species Brassica rapa
Class miRNA
Genome position ChrA1:16916561-16916777 [-]
Reference genome Brapa_1.0
Source SRR1592476
Length 24
Mature sequence(if miRNA) 194 - AAACCCUCAACUAAAGAUAGAUCG - 217
Stem-loop(if miRNA) -    -              AG          CU    U         AA      -  A    -A      AAC        CAC   CG         AUA     CGA
 AAAC CCUCAACUAAAGAU  AUCGUAAAAA  CCCC UCAACUAAA  AUUCGG GA AGAA  CCUUAA   UUUAGUUC   UGA  UUUGUCACC   UGUCA   U
 |||| ||||||||||||||  ||||||||||  |||| |||||||||  |||||| || ||||  ||||||   ||||||||   |||  |||||||||   |||||   A
 UUUG GGAGUUGAUUUCUA  UAGCGUUUUU  GGGG AGUUGAUUU  UAAGCU CU UCUU  GGAGUU   AAAUUAAG   AUU  AAACAGUGG   GCAGU   U
U    A              CA          -U    U         -G      G  A    CG      --A        AUA   AU         GAG     UUU
Stem-loop sequence AAACCCUCAACUAAAGAUAGAUCGUAAAAACUCCCCUUCAACUAAAAAAUUCGGGAAAGAAACCUUAAAACUUUAGUUCCACUGACGUUUGUCACCAUAUGUCACGAUAUUUUUGACGGAGGGUGACAAAUAUUAAUAGAAUUAAAAUUGAGGGCUUCUAUCGUCGAAUGUUUAGUUGAUGGGGUUUUUUGCGAUACAUCUUUAGUUGAGGAGUUUU