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BaseInfo

ncRNA ID	novel_bra_miR301
Species	Brassica rapa
Class	miRNA
Genome position	ChrA8:4621785-4621992 [+]
Reference genome	Brapa_1.0
Source	SRR1592476
Length	24
Mature sequence(if miRNA)	185 - UUAGAGUUGAUGAUUUAGGGUUUA - 208
Stem-loop(if miRNA)	--         A                         AAAAGUA    CUAAACCCUAAACCCUAAACCUUCAACUCUAAACCCUAAACCCUAAAACCCUAGAGUUG   AACCCUAAA CAUCAACUCUAAACCCUAAACCUUA       AACU                                                           A   ||||||||| |||||||||||||||||||||||||       ||||   UUGGGAUUU GUAGUUGAGAUUUGGGAUUUGGGAU       UAAA                                                           U AU         A                         ------A    AAGACUUUAAACUUGGGAUUUGAGAUUUUGGGAAUUGGAAGUUUAGAUUUGGGAUUUUG
Stem-loop sequence	AACCCUAAAACAUCAACUCUAAACCCUAAACCUUAAAAAGUAAACUCUAAACCCUAAACCCUAAACCUUCAACUCUAAACCCUAAACCCUAAAACCCUAGAGUUGAUGUUUUAGGGUUUAGAUUUGAAGGUUAAGGGUUUUAGAGUUUAGGGUUCAAAUUUCAGAAAAAUAUAGGGUUUAGGGUUUAGAGUUGAUGAUUUAGGGUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009111939.2	ncRNA:24   AUUU------GGGAUUUAGUAGUUGAGAUU   1   |=||------||||=||||||||*|||||| targets:371   UGAAAUUCAUCCCUGAAUCAUCAUCUCUAA   400 Target Full Sequence	2.5	PREDICTED: Brassica rapa 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial (LOC103835749), mRNA	2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial(LOC103835749)	coding protein	psRNATarget