| ncRNA ID | novel_bra_miR300 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA8:2756980-2757163 [-] |
| Reference genome | Brapa_1.0 |
| Source | SRR1592476 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - AUGGAGUGUGGUUGGAGAUGC - 21 |
| Stem-loop(if miRNA) |
-- C C A A G A U C U AUCUCCAACC CACUCCAUAUUUUACUC AAAAUU A AAAAU GAGUGGGA AUGGAGUG UGAACAAAAAAUAAAAG AUUACUCUA A |||||||||| ||||||||||||||||| |||||| | ||||| |||||||| |||||||| ||||||||||||||||| ||||||||| UAGAGGUUGG GUGAGGUAUAAAAUGAG UUUUAA U UUUUA CUCACCCU UACCUCAU ACUUGUUUUUUAUUUUC UAAUGAGGU A CG U A C C A A C C A |
| Stem-loop sequence | AUCUCCAACCCCACUCCAUAUUUUACUCCAAAAUUAAAAAAAUGGAGUGGGAAAUGGAGUGUUGAACAAAAAAUAAAAGCAUUACUCUAUAAAUGGAGUAAUCCUUUUAUUUUUUGUUCACUACUCCAUAUCCCACUCAAUUUUCUCAAUUUUAGAGUAAAAUAUGGAGUGUGGUUGGAGAUGC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009114998.2 |
|
2.5 | PREDICTED: Brassica rapa dynamin-related protein 4C-like (LOC103838553), mRNA | dynamin-related protein 4C-like(LOC103838553) | coding protein | psRNATarget | |||||||||
| XM_009131821.2 |
|
3.0 | PREDICTED: Brassica rapa histone-lysine N-methyltransferase ATXR6-like (LOC103854863), mRNA | histone-lysine N-methyltransferase ATXR6-like(LOC103854863) | coding protein | psRNATarget |