ncRNA ID | novel_bra_miR291 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA7:14381007-14381208 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1592476;SRR1592478;SRR1776880 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUCUAUUAUAGAGUUGGAUUUGC - 24 |
Stem-loop(if miRNA) |
--                                   A                       A                   U            U      U   AUUCUAUUAUAGAGUUGGAUUUGCUCCAAUGGUUC CUCUAUAAUAGAGUUACUCUAUA UAGAGUGAAAUAUAGAGUA UCUUGUUUUUUU ACUCUA A   ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||   UGAGAUAAUAUCUCAACUUAAACGAGGUUACCAAG GAGAUAUUAUCUCAAUGAGAUAU AUCUCACUUUAUAUCUCAU AGAAUAAAAAAA UGAGGU U AU                                   G                       -                   U            -      U |
Stem-loop sequence | AUUCUAUUAUAGAGUUGGAUUUGCUCCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGAGUAUUCUUGUUUUUUUUACUCUAUAUUUGGAGUAAAAAAAUAAGAUUACUCUAUAUUUCACUCUAUAUAGAGUAACUCUAUUAUAGAGGGAACCAUUGGAGCAAAUUCAACUCUAUAAUAGAGUUA |