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BaseInfo

ncRNA ID ath-miRf10740-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - AAAGUCGCAAUUCCCUUGCAACA - NA
Stem-loop(if miRNA)     U  U            U            CAC  AACUAC   UC
CAAA GG AAAAAGUCGCAA UCCCUUGCAACA   GC      AGU  U
|||| || |||||||||||| ||||||||||||   ||      |||
GUUU CU UUUUUUAGCGUU AGGGAGCGUUGU   CG      UCA  A
    U  -            U            CAA  CUCCCU   UG
Stem-loop sequence CAAAUGGUAAAAAGUCGCAAUUCCCUUGCAACACACGCAACUACAGUUCUAGUACUUCCCUCGCAACUGUUGCGAGGGAUUUGCGAUUUUUUUCUUUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY123032.1
ncRNA:23   ACAACGUUCCCUUAACGCUGAAA   1
  |||||||||||||||*|||||||
targets:1142   UGUUGCAAGGGAAUUCCGACUUU   1164

1.5 Arabidopsis thaliana unknown protein (At1g04200) mRNA, complete cds NA coding protein psRNATarget
NM_001331468.1
ncRNA:23   ACAACGUUCCCUUAACGCUGAAA   1
  |||||||||||||||*|||||||
targets:1361   UGUUGCAAGGGAAUUCCGACUUU   1383

1.5 Arabidopsis thaliana dyggve-melchior-clausen syndrome protein mRNA dyggve-melchior-clausen syndrome protein(AT1G04200) coding protein psRNATarget
BX816386.1
ncRNA:23   ACAACGUUCCCUUAACGCUGAAA   1
  |||||||||||||||*|||||||
targets:1317   UGUUGCAAGGGAAUUCCGACUUU   1339

1.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZA07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
AY091092.1
ncRNA:23   ACAACGUUCCCUUAACGCUGAAA   1
  |||||||||||||||*|||||||
targets:1328   UGUUGCAAGGGAAUUCCGACUUU   1350

1.5 Arabidopsis thaliana unknown protein (At1g04200) mRNA, complete cds NA coding protein psRNATarget
NM_100301.5
ncRNA:23   ACAACGUUCCCUUAACGCUGAAA   1
  |||||||||||||||*|||||||
targets:1423   UGUUGCAAGGGAAUUCCGACUUU   1445

1.5 Arabidopsis thaliana dyggve-melchior-clausen syndrome protein mRNA dyggve-melchior-clausen syndrome protein(AT1G04200) coding protein psRNATarget
NM_001331467.1
ncRNA:23   ACAACGUUCCCUUAACGCUGAAA   1
  |||||||||||||||*|||||||
targets:1423   UGUUGCAAGGGAAUUCCGACUUU   1445

1.5 Arabidopsis thaliana dyggve-melchior-clausen syndrome protein mRNA dyggve-melchior-clausen syndrome protein(AT1G04200) coding protein psRNATarget