ncRNA ID | novel_bra_miR284 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA6:7219617-7219690 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1592476 |
Length | 24 |
Mature sequence(if miRNA) | 51 - AAGCGGUGCGGGACAAGCGGUUCA - 74 |
Stem-loop(if miRNA) |
--U ACA --G ----U G ACCGCUUGUCCCGCAC GUUUAA GC CC A |||||||||||||||| |||||| || || UGGCGAACAGGGCGUG CGAAUU CG GG A ACU --G UAA UCAGU U |
Stem-loop sequence | UACCGCUUGUCCCGCACACAGUUUAAGGCUCCGAAUGGUGACUGCAAUUUAAGCGGUGCGGGACAAGCGGUUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018659499.1 |
|
0.0 | PREDICTED: Brassica rapa squalene epoxidase 4 (LOC103874805), mRNA | NA | coding protein | psRNATarget |