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BaseInfo

ncRNA ID novel_bra_miR284
Species Brassica rapa
Class miRNA
Genome position ChrA6:7219617-7219690 [+]
Reference genome Brapa_1.0
Source SRR1592476
Length 24
Mature sequence(if miRNA) 51 - AAGCGGUGCGGGACAAGCGGUUCA - 74
Stem-loop(if miRNA) --U                ACA      --G  ----U  G
   ACCGCUUGUCCCGCAC   GUUUAA   GC     CC A
   ||||||||||||||||   ||||||   ||     ||
   UGGCGAACAGGGCGUG   CGAAUU   CG     GG A
ACU                --G      UAA  UCAGU  U
Stem-loop sequence UACCGCUUGUCCCGCACACAGUUUAAGGCUCCGAAUGGUGACUGCAAUUUAAGCGGUGCGGGACAAGCGGUUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018659499.1
ncRNA:24   ACUU-GGCGAACAGGGCGUGGCGAA   1
  **||-||||||||||||||||||||
targets:84   CCAAUCCGCUUGUCCCGCACCGCUU   108

0.0 PREDICTED: Brassica rapa squalene epoxidase 4 (LOC103874805), mRNA NA coding protein psRNATarget