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BaseInfo

ncRNA ID novel_bra_miR271
Species Brassica rapa
Class miRNA
Genome position ChrA4:9471158-9471316 [+]
Reference genome Brapa_1.0
Source SRR1592476
Length 24
Mature sequence(if miRNA) 1 - AUUCUAUUAUAGAGUUGGAUUUGC - 24
Stem-loop(if miRNA) --           G                      ----C      UAAUAGAGUGAAAUAUAGAGUAUUCUUGUUUUUU
  AUUCUAUUAUA AGUUGGAUUUGCUCCAAUGGUU     ACUCUA                                  C
  ||||||||||| ||||||||||||||||||||||     ||||||                                  A
  UGAGAUAAUAU UCAACUUAAACGAGGUUACCAA     CUUUAU                                  U
AU           A                      UAUCA      AUCUCAUUAGAAUAAAAAAAUGAGGUUUAUAUCU
Stem-loop sequence AUUCUAUUAUAGAGUUGGAUUUGCUCCAAUGGUUCACUCUAUAAUAGAGUGAAAUAUAGAGUAUUCUUGUUUUUUCAUUCUAUAUUUGGAGUAAAAAAAUAAGAUUACUCUAUAUUUCACUAUAACCAUUGGAGCAAAUUCAACUAUAUAAUAGAGUUA