ncRNA ID | novel_bra_miR271 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA4:9471158-9471316 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1592476 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUCUAUUAUAGAGUUGGAUUUGC - 24 |
Stem-loop(if miRNA) |
--           G                      ----C      UAAUAGAGUGAAAUAUAGAGUAUUCUUGUUUUUU   AUUCUAUUAUA AGUUGGAUUUGCUCCAAUGGUU     ACUCUA                                  C   ||||||||||| ||||||||||||||||||||||     ||||||                                  A   UGAGAUAAUAU UCAACUUAAACGAGGUUACCAA     CUUUAU                                  U AU           A                      UAUCA      AUCUCAUUAGAAUAAAAAAAUGAGGUUUAUAUCU |
Stem-loop sequence | AUUCUAUUAUAGAGUUGGAUUUGCUCCAAUGGUUCACUCUAUAAUAGAGUGAAAUAUAGAGUAUUCUUGUUUUUUCAUUCUAUAUUUGGAGUAAAAAAAUAAGAUUACUCUAUAUUUCACUAUAACCAUUGGAGCAAAUUCAACUAUAUAAUAGAGUUA |