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BaseInfo

ncRNA ID novel_bra_miR268
Species Brassica rapa
Class miRNA
Genome position ChrA3:22202357-22202532 [-]
Reference genome Brapa_1.0
Source SRR1592476
Length 24
Mature sequence(if miRNA) 1 - AACUUAAGGGACACCAAUAAUGAU - 24
Stem-loop(if miRNA) --                       AAG CC      A    A       A              C      A  -CUU    C    C
  CAUUAUUGGUGUCCCUUAGGUUG   C  UUAAGC UAGG UCCCUUA CUUUUAACUAAAAA GUUAAG GA    CUCU AAAU U
  |||||||||||||||||||||||   |  |||||| |||| ||||||| |||||||||||||| |||||| ||    |||| |||| C
  GUAAUAACCACAGGGAAUUCAAC   G  AAUUCG AUCC AGGGAAU GAAAAUUGAUUUUU CGAUUC CU    GGGA UUUA U
UA                       CCA -A      C    C       C              U      -  UACU    A    U
Stem-loop sequence CAUUAUUGGUGUCCCUUAGGUUGAAGCCCUUAAGCAUAGGAUCCCUUAACUUUUAACUAAAAACGUUAAGAGACUUCUCUCAAAUCUCUUAUUUAAGGGUCAUUCCUUAGCUUUUUUAGUUAAAAGCUAAGGGACCCUACGCUUAAAGACCCAACUUAAGGGACACCAAUAAUGAU