ncRNA ID | novel_bra_miR265 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA3:28337556-28337658 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1592476 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGGAGUGAAAUAUGGAGUUGGGU - 24 |
Stem-loop(if miRNA) |
-    -      -    U               GAUGAA  AAAAAA       U  UCUA UUCCAU UUUC ACUCCAUAAUGGAGU      CA      AAAUAGA U  |||| |||||| |||| |||||||||||||||      ||      |||||||  GGGU GAGGUA AAAG UGAGGUAUUAUUUUA      GU      UUUAUCU A U    U      U    -               AAUAAG  -----A       C |
Stem-loop sequence | UCUAUUCCAUUUUCUACUCCAUAAUGGAGUGAUGAACAAAAAAAAAAUAGAUUACUCUAUUUAUGGAAUAAAUUUUAUUAUGGAGUGAAAUAUGGAGUUGGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018653025.1 |
|
2.5 | PREDICTED: Brassica rapa uncharacterized LOC108869048 (LOC108869048), mRNA | NA | coding protein | psRNATarget |