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BaseInfo

ncRNA ID	ath-miRf10738-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - ACUCGACCCAGUGGUCGAGU - NA
Stem-loop(if miRNA)	UGU          AG           UGUCA  G        GGAGUGU       ---   CCAGGGGGUCGAGUGAUUGG GAAG   UACUCGACCC  UGGUCGAGUGG     UC AGUAGCAU       GGUUACU   CGA                    U ||||   ||||||||||  |||||||||||     || ||||||||       |||||||   |||                    A CUUC   AUGAGCUGGG  ACCAGCUCAUU     AG UCGUCGUG       GCCGGGG   CAG                    A     UGU          GA           ----G  G        ----UGA       AAC   AUCAUUGUAACUCCGGCAAG
Stem-loop sequence	GAAGUGUUACUCGACCCAGUGGUCGAGUGGUGUCAUCGAGUAGCAUGGAGUGUGGUUACUCGACCAGGGGGUCGAGUGAUUGGUAAGAACGGCCUCAAUGUUACUAGACCAAGGGGCCGAGUGUGCUGCUGGAGUUACUCGACCAAGGGGUCGAGUAUGUCUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183005.1	ncRNA:20   UGAGCUGGUGACCCAGCUCA   1   ||||||||||*||||||||| targets:1925   ACUCGACCACGGGGUCGAGU   1944 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
AK230088.1	ncRNA:20   UGAGCUGGUGACCCAGCUCA   1   ||||||=||=|||||||||| targets:1661   ACUCGAUCAUUGGGUCGAGU   1680 Target Full Sequence	2.5	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-73-D14	NA	coding protein	psRNATarget
BT012022.1	ncRNA:20   UGAGCUGGUG-ACCCAGCUCA   1   ||||||||||-|||||||||| targets:210   ACUCGACCACCUGGGUCGAGU   230 Target Full Sequence	3.0	Arabidopsis thaliana At2g10890 mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:20   UGAGCUGGUG-ACCCAGCUCA   1   ||||||||||-|||||||||| targets:832   ACUCGACCACCUGGGUCGAGU   852 Target Full Sequence	3.0	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
EF183192.1	ncRNA:20   UGAGCUGGUG-ACCCAGCUCA   1   ||||||||||-|||||||||| targets:852   ACUCGACCACCUGGGUCGAGU   872 Target Full Sequence	3.0	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
AY227642.1	ncRNA:20   UGAGCUGGUG-ACCCAGCUCA   1   ||||||||||-|||||||||| targets:1072   ACUCGACCACGUGGGUCGAGU   1092 Target Full Sequence	3.0	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183193.1	ncRNA:20   UGAGCUGGUG-ACCCAGCUCA   1   ||||||||||-|||||||||| targets:1179   ACUCGACCACCUGGGUCGAGU   1199 Target Full Sequence	3.0	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:20   UGAGCUGGUG-ACCCAGCUCA   1   ||||||||||-|||||||||| targets:1227   ACUCGACCACCUGGGUCGAGU   1247 Target Full Sequence	3.0	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget