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BaseInfo

ncRNA ID	novel_bra_miR264
Species	Brassica rapa
Class	miRNA
Genome position	ChrA3:29705323-29705504 [-]
Reference genome	Brapa_1.0
Source	SRR1592476
Length	24
Mature sequence(if miRNA)	159 - AAUGGAAUAAAAGUGAAUAUGGAA - 182
Stem-loop(if miRNA)	--      A          U     A     AAUGC    A   A       A C      C     --AAAAU  ACUCCAUAAAUGGAGU   AAUGGA UAAAAGUGAA AUGGA UAAGG     UCAA CUC ACUCCAU U UCACUC AUAAU       UU                A   |||||| |||||||||| ||||| |||||     |||| ||| ||||||| | |||||| |||||       ||                A   UUACCU AUUUUCACUU UAUCU AUUUU     AGUU GGG UGAGGUA A AGUGAG UAUUA       AC                U UU      C          U     C     AACAA    -   A       A A      A     CCUCACU  UUGUUUGUUUUUUAUC
Stem-loop sequence	AAUGGAAUAAAAGUGAAUAUGGAAUAAGGAAUGCUCAAACUCAACUCCAUAUCUCACUCCAUAAUAAAAUUUACUCCAUAAAUGGAGUAAUCUAUUUUUUGUUUGUUCAUCACUCCAUUAUAGAGUGAAAAAUGGAGUAGGGUUGAAACAAUUUUACUCUAUUUUCACUUUUACUCCAUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009130794.2	ncRNA:24   AAGGUAUAAGUGAAAAUAAGGUAA   1   ||=|-|*||||=|||||||||||| targets:27   UUUC-UCUUCAUUUUUAUUCCAUU   49 Target Full Sequence	2.5	PREDICTED: Brassica rapa phospholipid-transporting ATPase 10 (LOC103853897), mRNA	phospholipid-transporting ATPase 10(LOC103853897)	coding protein	psRNATarget