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BaseInfo

ncRNA ID ath-miRf10737-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - UGGUGAUGUCCUCUAGUCGACC - NA
Stem-loop(if miRNA)       - AG    G    -CCU   G      AGGG          UCU   GAGG
GAGGUG A  UGGU AUGU    CUA UCGACC    GGUCGAGUGG   GCU    U
|||||| |  |||| ||||    ||| ||||||    ||||||||||   |||
CUUCGC U  ACUA UACG    GGU AGCUGG    CCAGCUCAUC   CGA    U
      C GA    G    UUUU   G      GGGA          -UU   AGUG
Stem-loop sequence GAGGUGAAGUGGUGAUGUCCUCUAGUCGACCAGGGGGUCGAGUGGUCUGCUGAGGUUGUGAAGCUUCUACUCGACCAGGGGGUCGAGUGGUUUUGCAUGAUCAAGUCCGCUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183042.1
ncRNA:22   CCAGCUGAUCUCCUGUAGUGGU   1
  ||||||*|||||||||||||=|
targets:1585   GGUCGAGUAGAGGACAUCACUA   1606

2.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget
EF183194.1
ncRNA:22   CCAGCUGAUCUCCUGUAGUGGU   1
  ||||||*||||*||||||||||
targets:463   GGUCGAGUAGAAGACAUCACCA   484

2.5 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget
AY227642.1
ncRNA:22   CCAGCUGAUCUCCUGUAGUGGU   1
  ||||||*|||||*|||||||||
targets:822   GGUCGAGUAGAGCACAUCACCA   843

2.5 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget