ncRNA ID | novel_bra_miR254 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA2:21300746-21300881 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1592476;SRR1592478 |
Length | 24 |
Mature sequence(if miRNA) | 113 - AAGUGACACUGAAGAUGGAGCUGG - 136 |
Stem-loop(if miRNA) |
--     AC        -U  A       --------U      -U  -- CGAAAUGAGCCUUGUUCAGCUUAA   AAGUG  ACUGAAGA  GG GCUGGUU         AGCUGA  GG  G                        A   |||||  ||||||||  || |||||||         ||||||  ||  |   UUUAC  UGACUUCU  CC CGACCAG         UUCUUU  UU  G                        G AC     -C        UU  -       CUUAAACCA      AU  GG CAUAACGUGAAAAAUACUUGAAAA |
Stem-loop sequence | AAGUGACACUGAAGAUGGAGCUGGUUUAGCUGAUGGGCGAAAUGAGCCUUGUUCAGCUUAAAGAAAAGUUCAUAAAAAGUGCAAUACGGGUUUAUUUCUUACCAAAUUCGACCAGCCCUUUCUUCAGUCCAUUUCA |