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BaseInfo

ncRNA ID novel_bra_miR254
Species Brassica rapa
Class miRNA
Genome position ChrA2:21300746-21300881 [-]
Reference genome Brapa_1.0
Source SRR1592476;SRR1592478
Length 24
Mature sequence(if miRNA) 113 - AAGUGACACUGAAGAUGGAGCUGG - 136
Stem-loop(if miRNA) --     AC        -U  A       --------U      -U  -- CGAAAUGAGCCUUGUUCAGCUUAA
  AAGUG  ACUGAAGA  GG GCUGGUU         AGCUGA  GG  G                        A
  |||||  ||||||||  || |||||||         ||||||  ||  |
  UUUAC  UGACUUCU  CC CGACCAG         UUCUUU  UU  G                        G
AC     -C        UU  -       CUUAAACCA      AU  GG CAUAACGUGAAAAAUACUUGAAAA
Stem-loop sequence AAGUGACACUGAAGAUGGAGCUGGUUUAGCUGAUGGGCGAAAUGAGCCUUGUUCAGCUUAAAGAAAAGUUCAUAAAAAGUGCAAUACGGGUUUAUUUCUUACCAAAUUCGACCAGCCCUUUCUUCAGUCCAUUUCA