ncRNA ID | novel_bra_miR250 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA1:8297682-8297862 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1592475 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGUAGCGACCGAGCGAAACGAGU - 24 |
Stem-loop(if miRNA) |
--                AA    G                            -AU  UCC                            AU   AUGUAGCGACCGAGCG  ACGA UGCUCGGUCGCUACGUAGCGACCGAGCG   CG   CGCUCGGUCGCUACGUAGCGACCGAGCG  C   ||||||||||||||||  |||| ||||||||||||||||||||||||||||   ||   ||||||||||||||||||||||||||||  G   UGCAUCGCUGGCUCGC  UGCU GCGAGCCAGCGAUGCAUCGCUGGCUCGC   GC   GCGAGCCAGCGAUGCAUCGCUGGCUCGC  U GA                CC    A                            CCU  -UA                            CC |
Stem-loop sequence | AUGUAGCGACCGAGCGAAACGAGUGCUCGGUCGCUACGUAGCGACCGAGCGAUCGUCCCGCUCGGUCGCUACGUAGCGACCGAGCGAUCGUCCCGCUCGGUCGCUACGUAGCGACCGAGCGAUCGUCCCGCUCGGUCGCUACGUAGCGACCGAGCGAUCGUCCCGCUCGGUCGCUACGUAG |