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BaseInfo

ncRNA ID novel_bra_miR250
Species Brassica rapa
Class miRNA
Genome position ChrA1:8297682-8297862 [+]
Reference genome Brapa_1.0
Source SRR1592475
Length 24
Mature sequence(if miRNA) 1 - AUGUAGCGACCGAGCGAAACGAGU - 24
Stem-loop(if miRNA) --                AA    G                            -AU  UCC                            AU
  AUGUAGCGACCGAGCG  ACGA UGCUCGGUCGCUACGUAGCGACCGAGCG   CG   CGCUCGGUCGCUACGUAGCGACCGAGCG  C
  ||||||||||||||||  |||| ||||||||||||||||||||||||||||   ||   ||||||||||||||||||||||||||||  G
  UGCAUCGCUGGCUCGC  UGCU GCGAGCCAGCGAUGCAUCGCUGGCUCGC   GC   GCGAGCCAGCGAUGCAUCGCUGGCUCGC  U
GA                CC    A                            CCU  -UA                            CC
Stem-loop sequence AUGUAGCGACCGAGCGAAACGAGUGCUCGGUCGCUACGUAGCGACCGAGCGAUCGUCCCGCUCGGUCGCUACGUAGCGACCGAGCGAUCGUCCCGCUCGGUCGCUACGUAGCGACCGAGCGAUCGUCCCGCUCGGUCGCUACGUAGCGACCGAGCGAUCGUCCCGCUCGGUCGCUACGUAG