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BaseInfo

ncRNA ID ath-miRf10736-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - AGAUGGUGUCGAUCGACACCUUC - NA
Stem-loop(if miRNA)    AU                   -C    UCGAUCUGACAC  UACGGGACGCU
GAG  GGUGUCGAUCGACACCUUC  ACUG            CC           C
|||  |||||||||||||||||||  ||||            ||           U
CUC  CCAUAGCUAGCUGUGGAAG  UGAC            CG           U
   -C                   CA    ------------  AGCAGAGUCUC
Stem-loop sequence GAGAUGGUGUCGAUCGACACCUUCCACUGUCGAUCUGACACCCUACGGGACGCUCUUCUCUGAGACGAGCCAGUACGAAGGUGUCGAUCGAUACCCCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
DQ069810.1
ncRNA:23   CUUCCACAGCUAGCUGUGGUAGA   1
  ***|||||||||||||||||||*
targets:208   CUUGGUGUCGAUCGACACCAUCG   230

1.0 Arabidopsis thaliana At2g13270 mRNA, partial sequence NA coding protein psRNATarget
EF183308.1
ncRNA:23   CU--UC-CACAGCUAGCUGUGGUAGA   1
  ||--||-||||||||||||||||||*
targets:1236   GACCAGAGUGUCGAUCGACACCAUCA   1261

3.0 Arabidopsis thaliana clone asmbl_5244 unknown mRNA sequence NA coding protein psRNATarget
EF183309.1
ncRNA:23   CU--UC-CACAGCUAGCUGUGGUAGA   1
  ||--||-||||||||||||||||||*
targets:1328   GACCAGAGUGUCGAUCGACACCAUCA   1353

3.0 Arabidopsis thaliana clone asmbl_5245 unknown mRNA sequence NA coding protein psRNATarget