| ncRNA ID | novel_bra_miR242 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA9:6072974-6073192 [-] |
| Reference genome | Brapa_1.0 |
| Source | SRR1592475 |
| Length | 24 |
| Mature sequence(if miRNA) | 196 - AAAACCCCUCAACUAAAGAUGAAU - 219 |
| Stem-loop(if miRNA) |
--A C C ACGG AAACCCCU AACUAAAGAUGAAUCGUAAAAAAAACCCUCAACUAAAAAUCAUGUGAAAUAAACCCUCAACUUUAGUUCCGUUAACAUAUGU ACCCUCCGUC U |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| U UUUGGGGA UUGAUUUCUACUUAGCAUUUUUUUUGGGAGUUGAUUUUUAGUACACUUUAUUUGGGAGUUGAAAUCAAGGCAAUUGUAUACA UGGGAGGCAG U UAA A A AUUU |
| Stem-loop sequence | AAAACCCCUCAACUAAAGAUGAAUCGUAAAAAAAACCCUCAACUAAAAAUCAUGUGAAAUAAACCCUCAACUUUAGUUCCGUUAACAUAUGUCACCCUCCGUCACGGUUUUUUAGACGGAGGGUAACAUAUGUUAACGGAACUAAAGUUGAGGGUUUAUUUCACAUGAUUUUUAGUUGAGGGUUUUUUUUACGAUUCAUCUUUAGUUAAGGGGUUUAAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009127599.2 |
|
2.5 | PREDICTED: Brassica rapa mechanosensitive ion channel protein 10-like (LOC103850813), mRNA | mechanosensitive ion channel protein 10-like(LOC103850813) | coding protein | psRNATarget |