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BaseInfo

ncRNA ID	ath-miRf10735-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - UACUCGACCACGUGGUUGAGU - NA
Stem-loop(if miRNA)	GAAGG         A             UGU    -G    AAGG G    -GG         UGAUACUCGACCAGGGGGUCGAGUAAUGUGA      UACUCGACC CGUGGUUGAGUAG   GAUC  AGUG    U AUGU   UGGACGUGA                               U      ||||||||| |||||||||||||   ||||  ||||    | ||||   |||||||||      GUGAGCUGG GCACCAGCUCAUC   CUGG  UCGU    A UGCA   GUGAGCUGG                               C --CUG         G             -UU    AG    --GA G    GUG         GGUACCAGCUCAUGGUGGACCUGUUGGUGAG
Stem-loop sequence	GAAGGUACUCGACCACGUGGUUGAGUAGUGUGAUCGAGUGAAGGUGAUGUGGUGGACGUGAUGAUACUCGACCAGGGGGUCGAGUAAUGUGAUCGAGUGGUUGUCCAGGUGGUACUCGACCAUGGGGUCGAGUGGUGACGUGAAGUGCUGAGGUCUUCUACUCGACCACGGGGUCGAGUGGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY231407.1	ncRNA:21   UGAGUUGGUGCACCAGCUCAU   1   ||||||||||||||||||||| targets:644   ACUCAACCACGUGGUCGAGUA   664 Target Full Sequence	0.0	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
EF183192.1	ncRNA:21   UGAGUUGGUGCACCAGCUCAU   1   |*||||||*|||||||||||| targets:171   AGUCAACCCCGUGGUCGAGUA   191 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:21   UGAGUUGGUGCACCAGCUCAU   1   |*||||||*|||||||||||| targets:546   AGUCAACCCCGUGGUCGAGUA   566 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:21   UGAGUUGGUGCACCAGCUCAU   1   |*||||||*|||||||||||| targets:546   AGUCAACCCCGUGGUCGAGUA   566 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:21   UGAGUUGGUGCACCAGCUCAU   1   ||||=|||*|||||||||||| targets:491   ACUCGACCCCGUGGUCGAGUA   511 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
EF183042.1	ncRNA:21   UGAGUUGGUGCACCAGCUCAU   1   ||||=||||||*||||||||| targets:1528   ACUCGACCACGAGGUCGAGUA   1548 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget