| ncRNA ID | novel_bra_miR230 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA8:442672-442791 [+] |
| Reference genome | Brapa_1.0 |
| Source | SRR1592475 |
| Length | 20 |
| Mature sequence(if miRNA) | 1 - UUGUUUUGUUUAGUUGGACA - 20 |
| Stem-loop(if miRNA) |
UUGUUUUG --G ---- - AC U -----G C AA UUUAGUUG ACAGAAA CAU GCU UUUC AAUUGUU GG UUUC U |||||||| ||||||| ||| ||| |||| ||||||| || |||| U AAGUUAAU UGUUUUU GUA UGG AAAG UUAACAA CC AAAG U --CUGAAA UAA AAAG A AA - AAUUUA A CU |
| Stem-loop sequence | UUGUUUUGUUUAGUUGGACAGAAACAUGCUACUUUCUAAUUGUUGGGCUUUCAAUUUUCGAAAACCAUUUAAAACAAUUGAAAAAGGUAAUGGAAAUUUUUGUAAUUAAUUGAAAAAGUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009153170.2 |
|
2.0 | PREDICTED: Brassica rapa dof zinc finger protein DOF5.6-like (LOC103874731), mRNA | dof zinc finger protein DOF5.6-like(LOC103874731) | coding protein | psRNATarget | |||||||||
| XM_009152155.2 |
|
2.5 | PREDICTED: Brassica rapa uncharacterized LOC103873762 (LOC103873762), mRNA | uncharacterized LOC103873762(LOC103873762) | coding protein | psRNATarget |