Search result

BaseInfo

ncRNA ID novel_bra_miR225
Species Brassica rapa
Class miRNA
Genome position ChrA8:2919525-2919681 [+]
Reference genome Brapa_1.0
Source SRR1592475
Length 24
Mature sequence(if miRNA) 1 - AUAUAUAGACGACUUACAAUUCAG - 24
Stem-loop(if miRNA) --    A                    UG      A          U        U    G    ----GA        G
  AUAU UAGACGACUUACAAUUCAGU  UCCGUC GACGACUUAC UGUAAGUC UCCA GAUU      CGAGGUUU A
  |||| ||||||||||||||||||||  |||||| |||||||||| |||||||| |||| ||||      |||||||| C
  UAUG GUCUGCUGAAUGUUAAGUCA  AGGCGG CUGCUGAAUG ACAUUCAG AGGU CUAA      GUUUUAAG C
AA    G                    GU      G          U        C    A    AAUAAG        A
Stem-loop sequence AUAUAUAGACGACUUACAAUUCAGUUGUCCGUCAGACGACUUACUUGUAAGUCUUCCAGGAUUGACGAGGUUUGACCAGAAUUUUGGAAUAAAAUCAUGGACGACUUACAUGUAAGUCGUCGGGCGGAUGACUGAAUUGUAAGUCGUCUGGGUAUAA