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BaseInfo

ncRNA ID novel_bra_miR221
Species Brassica rapa
Class miRNA
Genome position ChrA7:4621741-4621890 [+]
Reference genome Brapa_1.0
Source SRR1592475;SRR1592477
Length 24
Mature sequence(if miRNA) 1 - AUAUAACCCCAGUAAAUCGUCUGA - 24
Stem-loop(if miRNA) --     A                                                       AC       UUC
  AUAUA CCCCAGUAAAUCGUCUGAGUCGUCUGAAUUGUUGGAAGUCGUCUAGACGACUGAA  UUCAGUC   U
  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||
  UAUAU GGGGUCAUUUAGCAGACUCAGCAGACUUAACAACCUUCAGCAGAUCUGCUGACUU  AAGUCAG   A
CU     C                                                       CA       CAG
Stem-loop sequence AUAUAACCCCAGUAAAUCGUCUGAGUCGUCUGAAUUGUUGGAAGUCGUCUAGACGACUGAAACUUCAGUCUUCUAGACGACUGAAACUUCAGUCGUCUAGACGACUUCCAACAAUUCAGACGACUCAGACGAUUUACUGGGGCUAUAUUC