ncRNA ID | novel_bra_miR221 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA7:4621741-4621890 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1592475;SRR1592477 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAUAACCCCAGUAAAUCGUCUGA - 24 |
Stem-loop(if miRNA) |
--     A                                                       AC       UUC   AUAUA CCCCAGUAAAUCGUCUGAGUCGUCUGAAUUGUUGGAAGUCGUCUAGACGACUGAA  UUCAGUC   U   ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||   UAUAU GGGGUCAUUUAGCAGACUCAGCAGACUUAACAACCUUCAGCAGAUCUGCUGACUU  AAGUCAG   A CU     C                                                       CA       CAG |
Stem-loop sequence | AUAUAACCCCAGUAAAUCGUCUGAGUCGUCUGAAUUGUUGGAAGUCGUCUAGACGACUGAAACUUCAGUCUUCUAGACGACUGAAACUUCAGUCGUCUAGACGACUUCCAACAAUUCAGACGACUCAGACGAUUUACUGGGGCUAUAUUC |