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BaseInfo

ncRNA ID novel_bra_miR219
Species Brassica rapa
Class miRNA
Genome position ChrA7:6600784-6600894 [-]
Reference genome Brapa_1.0
Source SRR1592475;SRR1592477
Length 24
Mature sequence(if miRNA) 88 - AUGAGUUUUGUGAUUGUGUGAGAG - 111
Stem-loop(if miRNA) ---AU        U            G     GGUUUUU      G    -CC    G
     GAGUUUUG GAUUGUGUGAGA CUUAA       GAGUGA UUUU   UUAA A
     |||||||| |||||||||||| |||||       |||||| ||||   ||||
     CUUAGAGC UUAACAUAUUUU GAGUU       CUUAUU AGAA   AAUU G
GAUAC        -            -     -AUUAUU      G    AAU    A
Stem-loop sequence AUGAGUUUUGUGAUUGUGUGAGAGCUUAAGGUUUUUGAGUGAGUUUUCCUUAAGAGAUUAAUAAAAGAGUUAUUCUUAUUAUUGAGUUUUAUACAAUUCGAGAUUCCAUAG