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BaseInfo

ncRNA ID	novel_bra_miR217
Species	Brassica rapa
Class	miRNA
Genome position	ChrA1:15496346-15496505 [+]
Reference genome	Brapa_1.0
Source	SRR1592475;SRR1592478;SRR1776889
Length	24
Mature sequence(if miRNA)	1 - AAAAGUGAAUAUGGAGUAAGAAAU - 24
Stem-loop(if miRNA)	--         U           AA           C   -    A   AACUUU       ----------------   UU      U   AAAAGUGAA AUGGAGUAAGA  UGUUCCAACCC ACU CAAU UCU      AUAAUGA                AAU  ACUCCA A   ||||||||| |||||||||||  ||||||||||| ||| |||| |||      |||||||                |||  ||||||   UUUUCACUU UGUCUCAUUUU  ACAAGGUUGGG UGA GUUA AGG      UGUUACU                UUA  UGAGGU A UA         U           -A           A   A    A   -CUAAU       ACUUGUUUUUAUUUAU   -U      A
Stem-loop sequence	AAAAGUGAAUAUGGAGUAAGAAAUGUUCCAACCCCACUCAAUAUCUAACUUUAUAAUGAAAUUUACUCCAUAAAUGGAGUUAUUUAUUUAUUUUUGUUCAUCAUUGUUAAUCGGAAAUUGAAGUAGGGUUGGAACAAUUUUACUCUGUUUUCACUUUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009139789.2	ncRNA:24   UAAAGAAUGAGGUAUAAGUGAAAA   1   |*|*=||||||||||||||||||| targets:1342   ACUCUUUACUCCAUAUUCACUUUU   1365 Target Full Sequence	0.0	PREDICTED: Brassica rapa WRKY transcription factor 18-like (WRKY1), transcript variant X1, mRNA	WRKY transcription factor 18-like(WRKY1)	coding protein	psRNATarget