| ncRNA ID | novel_bra_miR215 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA7:2446550-2446767 [+] |
| Reference genome | Brapa_1.0 |
| Source | SRR1592475;SRR1776877;SRR1776880;SRR1777714;SRR1160826 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AUGUAGCGACCGAGCGGGACGAUC - 24 |
| Stem-loop(if miRNA) |
-- C -C U C A CGA CAA C A - AA A A AUGUAGCGACCGAG GGGA GA CGCUCGGU GCUACGUAGCGACCG GCU GC AGC CGGUUGCUACGUAGC ACCGAGCG UC UCCC CUCGGUCGCU U |||||||||||||| |||| || |||||||| ||||||||||||||| ||| || ||| ||||||||||||||| |||||||| || |||| |||||||||| UGUAUCGCUGGCUC CCCU CU GCGAGCCA CGAUGCAUCGUUGGC CGA CG UCG GCCAGCGAUGCAUCG UGGCUCGC AG AGGG GAGCCAGCGA G GA A AA - A C AAC AGC A C U -C C U |
| Stem-loop sequence | AUGUAGCGACCGAGCGGGACGAUCGCUCGGUCGCUACGUAGCGACCGAGCUCGAGCCAAAGCCCGGUUGCUACGUAGCAACCGAGCGUCAAUCCCACUCGGUCGCUAUGUAGCGACCGAGCGGGACGAUCGCUCGGUCGCUACGUAGCGACCGAGCUCGAGCCAAAGCCCGGUUGCUACGUAGCAACCGAGCGUCAAUCCCACUCGGUCGCUAUGUAG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009126102.1 |
|
1.5 | PREDICTED: Brassica rapa uncharacterized LOC103849316 (LOC103849316), mRNA | uncharacterized LOC103849316(LOC103849316) | coding protein | psRNATarget |