ncRNA ID | novel_bra_miR213 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA7:241521-241580 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1592475;SRR1592477;SRR1776889;SRR1777714;SRR1485281 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAUAUUGUUGAAACAGGAGGGCA - 24 |
Stem-loop(if miRNA) |
--A                G     ACUUC    AAUAUUGUUGAAACAG AGGGC     A    |||||||||||||||| |||||     A    UUAUGAUAAUUUUGUC UUCUG     A UAG                -     AUAAA |
Stem-loop sequence | AAAUAUUGUUGAAACAGGAGGGCACUUCAAAAAAUAGUCUUCUGUUUUAAUAGUAUUGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009142901.1 |
|
2.5 | PREDICTED: Brassica rapa uncharacterized LOC103865123 (LOC103865123), mRNA | uncharacterized LOC103865123(LOC103865123) | coding protein | psRNATarget |