ncRNA ID | novel_bra_miR198 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA6:24401714-24401771 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1592475;SRR1592477;SRR1776796;SRR1776877;SRR1776880;SRR1776889;SRR1776899;SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAACUGUGUAACCAAUUAGAUGU - 24 |
Stem-loop(if miRNA) |
--    CU  G          G U   GU   AAAA  GU UAACCAAUUA A GUU  A   ||||  || |||||||||| | |||   UUUU  UA GUUGGUUAAU U UAG  A AU    AG  G          G C   UU |
Stem-loop sequence | AAAACUGUGUAACCAAUUAGAUGUUGUAAUUGAUCUGUAAUUGGUUGGAUGAUUUUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009145191.2 |
|
3.0 | PREDICTED: Brassica rapa uncharacterized LOC103867153 (LOC103867153), mRNA | uncharacterized LOC103867153(LOC103867153) | coding protein | psRNATarget |