ncRNA ID | novel_bra_miR195 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA6:20409122-20409233 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1592475;SRR1776877;SRR1776899;SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGUAGCGACCGAGCGGGACGAUC - 24 |
Stem-loop(if miRNA) |
--              C    -C  U        C               A   CGA   AUGUAGCGACCGAG GGGA  GA CGCUCGGU GCUACGUAGCGACCG GCU   G   |||||||||||||| ||||  || |||||||| ||||||||||||||| |||   UGUAUCGCUGGCUC CCCU  CU GCGAGCCA CGAUGCAUCGUUGGC CGA   C GA              A    AA  -        A               C   AAC |
Stem-loop sequence | AUGUAGCGACCGAGCGGGACGAUCGCUCGGUCGCUACGUAGCGACCGAGCUCGAGCCAAAGCCCGGUUGCUACGUAGCAACCGAGCGUCAAUCCCACUCGGUCGCUAUGUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009126102.1 |
|
1.5 | PREDICTED: Brassica rapa uncharacterized LOC103849316 (LOC103849316), mRNA | uncharacterized LOC103849316(LOC103849316) | coding protein | psRNATarget |