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BaseInfo

ncRNA ID novel_bra_miR189
Species Brassica rapa
Class miRNA
Genome position ChrA5:816469-816620 [-]
Reference genome Brapa_1.0
Source SRR1592475;SRR1592478;SRR1776877;SRR1776880;SRR1776889;SRR1777714
Length 24
Mature sequence(if miRNA) 1 - ACUGGAUUUUUAGUUGAGGGUUUU - 24
Stem-loop(if miRNA) --     -            AU            A       UAGUUC                       CUAAA
  AACCC CAACUAAAAAUC  GUGAAAUAAACC UCAACUU      UGUUAACAUAUGUUACCCUCCGU     A
  ||||| ||||||||||||  |||||||||||| |||||||      |||||||||||||||||||||||     A
  UUGGG GUUGAUUUUUAG  CACUUUAUUUGG AGUUGAA      GCAAUUGUAUACAGUGGGAGGCA     A
UU     A            GU            G       UAUUUU                       AUGUC
Stem-loop sequence AACCCCAACUAAAAAUCAUGUGAAAUAAACCAUCAACUUUAGUUCUGUUAACAUAUGUUACCCUCCGUCUAAAAAACUGUAACGGAGGGUGACAUAUGUUAACGUUUUAUAAGUUGAGGGUUUAUUUCACUGGAUUUUUAGUUGAGGGUUUU