ncRNA ID | novel_bra_miR189 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:816469-816620 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1592475;SRR1592478;SRR1776877;SRR1776880;SRR1776889;SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACUGGAUUUUUAGUUGAGGGUUUU - 24 |
Stem-loop(if miRNA) |
--     -            AU            A       UAGUUC                       CUAAA   AACCC CAACUAAAAAUC  GUGAAAUAAACC UCAACUU      UGUUAACAUAUGUUACCCUCCGU     A   ||||| ||||||||||||  |||||||||||| |||||||      |||||||||||||||||||||||     A   UUGGG GUUGAUUUUUAG  CACUUUAUUUGG AGUUGAA      GCAAUUGUAUACAGUGGGAGGCA     A UU     A            GU            G       UAUUUU                       AUGUC |
Stem-loop sequence | AACCCCAACUAAAAAUCAUGUGAAAUAAACCAUCAACUUUAGUUCUGUUAACAUAUGUUACCCUCCGUCUAAAAAACUGUAACGGAGGGUGACAUAUGUUAACGUUUUAUAAGUUGAGGGUUUAUUUCACUGGAUUUUUAGUUGAGGGUUUU |