Search result

BaseInfo

ncRNA ID	novel_bra_miR188
Species	Brassica rapa
Class	miRNA
Genome position	ChrA5:3282817-3282999 [-]
Reference genome	Brapa_1.0
Source	SRR1592475
Length	24
Mature sequence(if miRNA)	1 - UUAUUGGUUGAAUUGUGGUUAGGU - 24
Stem-loop(if miRNA)	--                                                                                        U   CUAACCACAAUUCAACCAAUAAAAAAAUAGAAGAUAUAUUAUCAUUGGUCAUACAACAUUAAUUAUUAAUAAAUUUUACAUAGAAAAU U   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| U   GAUUGGUGUUAAGUUGGUUAUUUUUUUAUCUUCUAUAUAAUAGUAACCAGUAUGUUGUAAUUAAUAAUUAUUUAAAAUGUAUUUUUUG C UG                                                                                        G
Stem-loop sequence	CUAACCACAAUUCAACCAAUAAAAAAAUAGAAGAUAUAUUAUCAUUGGUCAUACAACAUUAAUUAUUAAUAAAUUUUACAUAGAAAAUUUUCGGUUUUUUAUGUAAAAUUUAUUAAUAAUUAAUGUUGUAUGACCAAUGAUAAUAUAUCUUCUAUUUUUUUAUUGGUUGAAUUGUGGUUAGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009116014.2	ncRNA:24   UGGAUUGGUGUUAAGUUGGUUAUU   1   =||--||||||||||=|||||||* targets:955   GCC--ACCACAAUUCGACCAAUAC   976 Target Full Sequence	2.5	PREDICTED: Brassica rapa uncharacterized LOC103839515 (LOC103839515), mRNA	uncharacterized LOC103839515(LOC103839515)	coding protein	psRNATarget