| ncRNA ID | novel_bra_miR187 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA5:5316392-5316547 [+] |
| Reference genome | Brapa_1.0 |
| Source | SRR1592475;SRR1592477;SRR1776880 |
| Length | 24 |
| Mature sequence(if miRNA) | 133 - AUUAUAGUGUAGCAUUGGAGAUGG - 156 |
| Stem-loop(if miRNA) |
-- -- -UU CUCC A A U UGC AUCUCCAAUG GCACU AUUUU UCUAUA UUUAC CUAAAAUAGAGUAACUCUAUUAUAGAGU GAAUU U |||||||||| ||||| ||||| |||||| ||||| |||||||||||||||||||||||||||| ||||| C UAGAGGUUAC UGUGA UAAAA AGAUAU AAGUG GAUUUUAUCUCAUUGAGAUAAUAUCUCA CUUGG C GG GA UAU ---C A A - UAA |
| Stem-loop sequence | AUCUCCAAUGGCACUUUAUUUUCUCCUCUAUAAUUUACACUAAAAUAGAGUAACUCUAUUAUAGAGUUGAAUUUGCUCCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUUUUAGAGUGAAAUAUAGACAAAAUUAUAGUGUAGCAUUGGAGAUGG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009148954.2 |
|
1.5 | PREDICTED: Brassica rapa myosin-11 (LOC103870789), transcript variant X2, mRNA | myosin-11(LOC103870789) | coding protein | psRNATarget | |||||||||
| XM_009148955.2 |
|
1.5 | PREDICTED: Brassica rapa myosin-11 (LOC103870789), transcript variant X1, mRNA | myosin-11(LOC103870789) | coding protein | psRNATarget |