Search result

BaseInfo

ncRNA ID ath_circ_001040
Species Arabidopsis thaliana
Class circRNA
Genome position 1:3055636-3057047[-]
Reference genome TAIR10
Source PlantcircBase
Method NA
Type exonic
Splice junction sequence CTTTTGAAGTTTTCGAGTTTGGATGCGTGTTTCTCGTAGGCAAAATTCTAACTTCAGCACCTTCTTCTTCAGCTCCTGATCAATTCTCCTTTGATTCTCCATCACCGCTCTGTTCTTTAATCTAGACAGATAACTTCTCCAGAAAACCCCAAAATTCAAAAACGTAAAAGGAAGCAGCTATTCATGTTCTTCACGTGACC
Tissues inflorescences, whole_plant
Exon boundary Yes-Yes
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence CTTTTGAAGTTTTCGAGTTTGGATGCGTGTTTCTCGTAGGCAAAATTCTAACTTCAGCACCTTCTTCTTCAGCTCCTGATCAATTCTCCTTTGATTCTCCACCTGATCCAGAAGAACAAAGGCTTTACTACATAAAACCAAAAATAAATCACAGAACTAAGAGATGCTAAAGCATGACGTGTTGTTACCTGATCTTCTAATTCCTTGGTCTTAAACCTCCAGTGAGCCGATATAATCTTCAGTTCATCTCTCAGTCTTGCAATTTCATCATCTTTAGCCGTCAAAAGTTTGTTGATTCTTTCAGAATTCTTTGGAGTATCTTCATTTAGCATGTTCCGCACCTCAGAGTTCTCCTTGGTCTTGACCACTGATACAGCCCGCATAATGTCACCTTCAACTTTCAAAAGCTCATCTCTTAGCTGCTTCTGTGAAGATTCTCTAACTCGCAGCTCCTTTCTTAGATTCTCTAGCTGCTCACCAAGTCTAGTTACTTGGTCCTCATGCTCTTTCAAAGAACCGGTCCTCTCATGCAATTGTTTCGAAAGCACTCTACAATGAGAATGTGCTGATTCAGCTGACAAAGCACTTGCCTCTGCAGTTGCATGTGTTGCTGCTAGCTGTGATTTGATATCAGCCAATTCCTTCACAAACTGCACAATAGGAGAACAGAAAAGTTGATAAGTTACGTCGGTAAAGGACGTGAGATCTCCTGAGTTTTGGCAGATTTAAGACCAAAGTCAGGTTCAAAAGACAATGGAGGACCAGCAAAGTTTGAAGAGGCAGACATAAGAATTAAGAAGGCTGATGAGAAACAATCAATGAAGTTGATGCTCTAACAGATCTATGTGTTCAAGCAGAATCAAGCAAAACTAGAGAAACTGGACAATCAAGAAATGTGAAAGAAAACAATCCTAACCTTCTCAGTAGCAACATCCGAAGCACGAATCTGCTCAACTTTCTCGTTTAGTTCCTTGGCAAGTTCATGCATTTCATCTTCCATTCTCTTAACTCTTGTTTCTGCCTCCTGCTCATATTGAAAACAGCTCAACAAAAGTCTCAACATCCAAACCAAAAGACTAAATCACAAAAAAAAGTAATAGCTGATAAATTCAGAACTTTGCTAACCTGCCTGGACATAGCTTCTTTTGAACACGACCGCTCCTGTTCCGCAAGACGAGTCCTCGCTTCTTTCAACTCAGTGGCCAAAGACACCACATTTCTCCTGAAACTCTGCTTCTTCTCACTCAAATCCTTCAACAAAGGATCATCCTCTCTTAGACTAACAGAAGTTGGCATTTTCTGAAACTGGAATATCACCGCTCTGTTCTTTAATCTAGACAGATAACTTCTCCAGAAAACCCCAAAATTCAAAAACGTAAAAGGAAGCAGCTATTCATGTTCTTCACGTGACC