ncRNA ID | novel_bra_miR179 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA4:5643458-5643633 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1592475;SRR1592477;SRR1776796;SRR1776889;SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAUAUAGACGACUUACAAUUCAG - 24 |
Stem-loop(if miRNA) |
--                                                                                     C   AUAUAUAGACGACUUACAAUUCAGUCGUCCAUCCAGGAUUUACGAGGUUUGACCAGAAUCUCGGAAUAAUGUCCUGGACGACUUA A   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   UAUAUAUCUGCUGAAUGUUAAGUCAGCAGGUAGGUCCUAAAUGCUCCAAACUGGUCUUAGAGCCUUAUUACAGGACCUGCUGAAU U AA                                                                                     G |
Stem-loop sequence | AUAUAUAGACGACUUACAAUUCAGUCGUCCAUCCAGGAUUUACGAGGUUUGACCAGAAUCUCGGAAUAAUGUCCUGGACGACUUACAUGUAAGUCGUCCAGGACAUUAUUCCGAGAUUCUGGUCAAACCUCGUAAAUCCUGGAUGGACGACUGAAUUGUAAGUCGUCUAUAUAUAA |