Search result

BaseInfo

ncRNA ID ath_circ_000950
Species Arabidopsis thaliana
Class circRNA
Genome position 1:2912345-2917162[+]
Reference genome TAIR10
Source PlantcircBase
Method NA
Type exonic
Splice junction sequence GTTTCACTACGTTGAGGATGGTTCTTCTGATGGGTGCCGAGAATAATCTTATGGAAGAAACAACAGCTGTTACCGAAGAAGATTCCTATGATGATGAGTTACAATTCTTCGTTGTCTTTGTTCCTGTTGCCAACTCCAGATTCCCACAGTGCCACAATCTCTAACATTGCAAAGTTGAGACATCTCATAAACTAACTCAG
Tissues root, inflorescences, whole_plant
Exon boundary Yes-No
Splicing signals AG-GT
circRNA sequence NA
Genomic sequence GTTTCACTACGTTGAGGATGGTTCTTCTGATGGGTGCCGAGAATAATCTTATGGAAGAAACAACAGCTGTTACCGAAGAAGATTCCTATGATGATGAGTTTCCCTGCGGAGATCCACAAGTTGAGCCTCGTGTTGGAGATGAATTTCAGGTCGACATTCCTCCTATGATGTCTGCAACCAAGCGTGCTGTGTTTCTTTCGACTCCTGTTGCTTTGGATGATTCGTCATATTCTTTTCTCATCGGACTACCTGTCCAAGTCATGTGGATAGACAAACATAGAAGAGGGCAAGGAAATGGAGATGACAATGTTGACATGAACCAGTCCTTGAAGTCTTTAAGAGCCAAAAAAAGCCGTTGCTCTGCCAAGATCAGAGGAAAGAGTGACAAGAATTCGGAAACCAAGAAGCAAAGATCGAATCTTGAGGCTGTTCCTGTGATACCGTCCAGTTCTTGGGAAGATTTGGAGGTGGCTAGCTTTGTTCTTGGTCTGTATACATTTGGGAAGAACTTTACTCAGGTGAAGAATTTCATGGAGAACAAAGGAATAGGAGAGATCATGTTGTTTTACTATGGGAAGTTCTACAATTCTGCAAAGTACCACAGTTGGTCTGAATCCCGAAAGAAGCGCAACCGCAAATGTGTATTTGGAAGAACGCTCTATTCAGGTTGGAGGCAACAACAATTGTTAACCCGTTTGATGCCTTCTATTCCTGATGAACCTCAGAAACAGATACTTGTGGATGTGAGTCTCTTTCACATCCTAATGCGGAATGCTTAACCACTGTATATTTGTTTTTTCATTGATCTTACTATTCGCAGGTCTCAAAGTCATTTGCTGAAGGTACTATCACTCTAGAGAAATACGTAAGTGCAGTGAAGAATCTTGTGGGTCTCAGGCTTCTGGTAGACGCTGTGGCGATTGGTAAAGAAAAAGAAGATCTCACGGTTCCTACATCAACACCAATGAAGACCAAACCATGGTTCACTGTTTCTTCAAAATCTTCTTTGGTCCCTGGAGAAGGGGATTACAATTCCCTCACATCGGCTGGCATAATAAATCAGTTAACTGGCTGTTCTCGTCTGAGCAAAGCCCGTTGCAATGATATATTCTGGGGCGCTGTATGGCCGCGTTTGCTAGCCAGAGGATGGCATTCACAGCAGCCAGAGGACCGTGGCTATTTCAAATCTAAGGATTACATTGTTTTCATTGTCCCTGGCGTGAAAAAGTTTTCAAGACAGGAGCTTGTCAAAGGAGATCACTACTTTGATTCCGTCAGTGATATTCTAACAAAGGTTGTGTCAGAGCCTGAACTTCTTGAGAATGAAACAGGAGGAGTTGCTGCAGAGCTTTCTTCTGACAAGTCAGATGAAGAGTCTGTCCCGTCTGATAGTCTAAGACACCGTTACCTCAGGTCTCCATGTTCTAACCGTGGAACTCTGGGAATGAAATTCACTGTTGTGGACACTAGTTTGGCTACTGGAGGAAAGTTGTGTGATTTACGGAATCTGAATGCAGAGTGTCTAGTAGTTTCTGAGCCAAACGTTCGTCTAGAAGTTAAAGATTCTCCTGTGCTTAAAAATTCTCTGGACAGTCAGAATGTGGAAAAGTCGCAAGTGAGGCCTCTGGATGCCAAGAACCAAGTGGATGACCCAATGCGATTCACGATTATTGATACGAGTGTAGACCACTGCGAAAAATCATCTGGGTTTAGGAGATGGAGATATTTACCAAGTGATGAAACAAAAAGGGGTCATGTAGGGGCTGATTCTGGTATAAAGGAAGAGAAGACTTTGGAGAAGGTTAAGGATCCATCAAAGAGGGTTATTAAGCATCGGTCTACCCCTCGAGCAGAAACTAATTATCATGCTGTAAATTCTGCACCATATTTGAAACGCAGACGGCTCAGTGCTTGCATTTCCAGAGAAAGTCCAGTGTCCAAACATATACCAGGTGATGATGACACAAAAATGACTGTTTGTCTTGAATCAGAGCAGCAAAGTATATGTGTGGTCCAACAACAAACTAGCACTTGTGAAGAGATGAATCAGGATAAAGAGACTGTGCCGTTGGTTGAGCATATGAAATTAAAGTCTGATCAATCAAAAAAGACTGGAACTGGGCCATCATCTTTGCTTGTTGAGATTCAAGAAACGACAGAGATTGAACCAAGCGGGTTAAATTCCAACACTGGTGTAGACAAGAACTGTTCTCCAGAGAAAATAAGTACATCCCATGAACAAAAACCAAATGGGCTTTGTTCAGTGTCAAAGTCGGACAAAAAACGAGCTTCCAATGATCTGGAACAAAAGCAAGCACTTGAGCTTCCTTCCATTTCAGGCTTAAACAATAGATCTTCTTCCAATGATCTGGGAACTACTCAAGAGCTGGGTTCATCTGAACAACAACACGGCCAACAGAATAATACAGATGGTCCTAGAAGACAGAGCACAAGAAAGAGACCATTGACCACTCGGGCTCTGGAAGCTATGGAATCCGACTTTCTTACAACCAAGAGAATGAAAAGCACGACTAAACCAGAACCGAGAAAGCGTGAAAGTTCAACGAAGAAAAAACGCTCAGCTAAAGCGTGTAACAGAAATGGGAGTGCAGACTTGGAGCACAGAAGAGAAGATAGAAACATTTTTATATGGAAAGCACCAACAAGTAAGCCCTTGGATCAAATAGAGGATACAAAGCCTCGCTATCTTCTCAATGAAGCAAGAACTGAGAGTAAGACTCTAGATAGAATACAGGAGTCAAGGCCGGTCCTAACTGAATACCGTAAGCTTCCCCCGATTGTATTGAAGCTTCCGTTCAGGCGTGGCTAAGGAGAAGATTGGACTTAAGTCTGAAAGTTTTGATCGCTGGATGTGAGAAGATTGGTCTTCCTGAAGCATAAATGTGTACAGAAGAGAAATGTTTTACACAAAGGATTTTTTATTCCTCTTTTATGCTTATTATTTCCATAATTAGGCAGAAGTAATGTTTCTATTATTGGTTTGCTTTGGAGTTATTTGAAGTAGCTTTTCATATGGTCTATTATTCAGAAATATGAAGTTGAAATAATGATTGTTATGAATATAACCAAGCATGATATACAAAGAGTCGATCTAGATACATACAAATCCTCCCGAATAGTAGTAGATAGTAGTAGTATAAACTAAAGTCACGAGAATGATTTTTAAACTACTATACAAATCTTGACTGATTTATGTGCAGCTCATTTGCTGCGGTCGCTTGTTTAAGTTGTGACTTGTGAGAGACGGCTTTGGTTAAGTTAGAGTCCTCAAAACCAAGCCCTGCTCCAAATCTTTTGCAGCCAAATAACATAGGAACCAAATTGTCAGTTCAAATTCATTTCACACTCTTTAGATTAGTTTTGGCTTACTTTGGATCCAAGACCAGATTCTGAACCTCTATGAAGGCTGAGCTAGCTGCGTTAGAAGCTATCTTTCCCATCTGATATCAAAAAACCAATTTTTTCAACAAAGTTTGTTTAATTTATTACAAGCCGGCTGAGTCAAAGATTGGGACGATCAAATTTGTTTATTTTTTACTAAAACATTATTTGGCAAATGGTTTGATACAGTTTTACAAACGTTTAATTATGAGATTACTAACTTTCATTTGACTGAACATGTTTTCAGTCTTTCAAGTAATGAAGACCACATGCATGATCAAAAAGAAAGAAGAAGACAGACGACCTGATTTGATGGCCTTATGGGCTTTCTGTTTTCTGATATATATAAGTTTGTTTCAGTTTTTCTACGTCCATGGGTCCTTCTATTTTTAGCCCATTATGAACTTTGAAGCCACGAAATCCATCGACTGTTGTTTACCTTGGCTTAAGGTGAACTACTTGCTTTATTTATCTTACACTTTTTCGAAGTAAGTATTTTGGCAAAAGAAAACTAAAAGTATCTTTGCTCAAAAAAAAAAAAAAAAACTGAAATTATAAAAAATACAGCACTTCAAATTAAAGAAACTAAACTAAATTGAGTGATCTATAGTTTATATAGTTATTATGAAATAGTAAAAAAGTTGATGGTTTTTAGTACCTATGTAATTTTGGATGGTTTTACTGCTACCTATATAATTTAAACATGACGCTAGTTTTTTTTATAAAAAAAATCTAATATGGATTTATATTTACATCATACGAGAGTTCATCAAAAAATGAGATAAGTTCATCATAAACTGATTGGTTACATTATATGATTATATAGTAATTTAGCAAAATTTAAAATTATTTGACTACAATTACGAACATTTCCATTTAGCGAAGTTTCCCTTAAATAGTTTGAATATATATTAAATAATAGTGTAAATCTTTTATAACCTTTTTAAACATCATATTATGTTAATATTGATTGAAATTTAGCATGAAACTATATCATCAATTAGCGTAAAAAGAAAAGAAAAAAAACCTAGTAGTAGCACATCGAATGGAATAATGAGGAGAACACAAAACACGTCCACGACTTTAGAATATTTCTTAACATTGAACACTTAAGAATTGAAAACAATAAAAACACTCTAATAAACCCTTAAAATAGCCAATGAAAATCTCCAAAGTGTGCATATAGAAAGAAAAAAAAAGATCTTTATATTGCGACTCTCTCATATTTTGCTCTCCTTTTATGTGCCTCATTCTCCTCTCGAAGACTTCGTGTTGAAAGAGCGACCAGTGCTCTTTCTCTCTATCCACAAACACGAACAATTCTTCGTTGTCTTTGTTCCTGTTGCCAACTCCAGATTCCCACAGTGCCACAATCTCTAACATTGCAAAGTTGAGACATCTCATAAACTAACTCAG