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BaseInfo

ncRNA ID novel_bra_miR175
Species Brassica rapa
Class miRNA
Genome position ChrA4:7002787-7002834 [-]
Reference genome Brapa_1.0
Source SRR1592475;SRR1776796;SRR1776899;SRR1777714
Length 23
Mature sequence(if miRNA) 26 - GUAGCGACCGAGCGGGACGAUCA - 48
Stem-loop(if miRNA) --               GA     A
  GUAGCGACCGAGCGG  CGAUC C
  |||||||||||||||  |||||
  CAUCGCUGGCUCGCC  GCUGG U
UG               --     C
Stem-loop sequence GUAGCGACCGAGCGGGACGAUCACUCGGUCGCCGCUCGGUCGCUACGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009126102.1
ncRNA:23   ACUAGCAGGGCGAGCCAGCGAUG   1
  *|=|||||||||||||||||||=
targets:535   AGGUCGUCCCGCUCGGUCGCUAU   557

1.0 PREDICTED: Brassica rapa uncharacterized LOC103849316 (LOC103849316), mRNA uncharacterized LOC103849316(LOC103849316) coding protein psRNATarget