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BaseInfo

ncRNA ID	ath-miRf10729-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - UCGACCUGGGGGUCGAGUGGU - NA
Stem-loop(if miRNA)	UG            UCU   G   CUACUCGACC  GGGGUCGAGUGG   CUU AGA ||||||||||  ||||||||||||   ||| ||U GGUGAGCUGG  CUCCAGCUCAUC   GAA UUC           GU            CUC   G
Stem-loop sequence	CUACUCGACCUGGGGGUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUACUCGACCUCUGGGUCGAGUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_103391.1	ncRNA:21   UGGUGAGCUGGGGGUCCAGCU   1   ||||||||||||||||||||| targets:1103   ACCACUCGACCCCCAGGUCGA   1123 Target Full Sequence	0.0	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
BT025674.1	ncRNA:21   UGGUGAGCUGGGGGUCCAGCU   1   *|=|||||||||||||||||| targets:186   UCUACUCGACCCCCAGGUCGA   206 Target Full Sequence	1.0	Arabidopsis thaliana	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:21   UGGUGAGCUGGGGGUCCAGCU   1   |*|||||||||||*||||||| targets:1058   AGCACUCGACCCCGAGGUCGA   1078 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
BT015478.1	ncRNA:21   UGGUGAGCUGGGGGUCCAGCU   1   =|||||||||||||*|||||| targets:229   GCCACUCGACCCCCUGGUCGA   249 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:21   UGGUGAGCUGGGGGUCCAGCU   1   =|||||||||||||*|||||| targets:229   GCCACUCGACCCCCUGGUCGA   249 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:21   UGGUGAGCUGGGGGUCCAGCU   1   ||||||||||||||*|||||| targets:89   ACCACUCGACCCCCUGGUCGA   109 Target Full Sequence	1.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183194.1	ncRNA:21   UGGUGAGCUGGGGGUCCAGCU   1   |||||||||||*||||||||| targets:448   ACCACUCGACCACCAGGUCGA   468 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:21   UGGUGAGCUGGGGGUCCAGCU   1   ||||||||||||||*|||||| targets:123   ACCACUCGACCCCCUGGUCGA   143 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
AY227642.1	ncRNA:21   UGGUGAGCUGGGGGUCCAGCU   1   |||||||||||||*||||||| targets:853   ACCACUCGACCCCGAGGUCGA   873 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183193.1	ncRNA:21   UGGUGAGCUGGGGGUCCAGCU   1   ||||||||||||||*|||||| targets:498   ACCACUCGACCCCCUGGUCGA   518 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:21   UGGUGAGCUGGGGGUCCAGCU   1   ||||||||||||||*|||||| targets:498   ACCACUCGACCCCCUGGUCGA   518 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:21   UGGUGAGCUGGGGGUCCAGCU   1   |=||||||||||||*|||||| targets:1570   AUCACUCGACCCCCUGGUCGA   1590 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:21   UGGUGAGCUGGGGGUCCAGCU   1   |=|||||||||||*||||||| targets:1616   AUCACUCGACCCCGAGGUCGA   1636 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:21   UGGU--GAGCUGGGGGUCCAGCU   1   ||||--||||||||||||||||| targets:133   ACCAUACUCGACCCCCAGGUCGA   155 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:21   UGGUGAGCUGGGGGUCCAGCU   1   *|=|||||||||||*|||||| targets:180   UCUACUCGACCCCCUGGUCGA   200 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:21   UGGU--GAGCUGGGGGUCCAGCU   1   ||||--||||||||||||||||| targets:133   ACCAUACUCGACCCCCAGGUCGA   155 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:21   UGGUGAGCUGGGGGUCCAGCU   1   *|=|||||||||||*|||||| targets:180   UCUACUCGACCCCCUGGUCGA   200 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget