ncRNA ID | novel_bra_miR173 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA4:17897145-17897326 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1592475;SRR1592478 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAUAUGGAGUGAGGUUGGAGAUG - 24 |
Stem-loop(if miRNA) |
--                                                 A    A    A     C            G       CAU   UCUCCAACCUCACUCCAUAUUUUACUCCAAAAUUGAGAAAAUGGAGUGG AAAU GAGU AUGAA AAAAAAUAAAAG AUUACUC   U   ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||| |||||||||||| |||||||   AGAGGUUGGAGUGAGGUAUAAAAUGAGGUUUUAACUCUUUUACCUUACC UUUA CUCA UACUU UUUUUUAUUUUC UAAUGAG   U GU                                                 C    C    A     A            G       AUA |
Stem-loop sequence | UCUCCAACCUCACUCCAUAUUUUACUCCAAAAUUGAGAAAAUGGAGUGGAAAAUAGAGUAAUGAACAAAAAAUAAAAGGAUUACUCCAUUUAUAGAGUAAUGCUUUUAUUUUUUAUUCAUAACUCCAUUUCCCAUUCCAUUUUCUCAAUUUUGGAGUAAAAUAUGGAGUGAGGUUGGAGAUG |