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BaseInfo

ncRNA ID novel_bra_miR173
Species Brassica rapa
Class miRNA
Genome position ChrA4:17897145-17897326 [-]
Reference genome Brapa_1.0
Source SRR1592475;SRR1592478
Length 24
Mature sequence(if miRNA) 1 - AAAUAUGGAGUGAGGUUGGAGAUG - 24
Stem-loop(if miRNA) --                                                 A    A    A     C            G       CAU
  UCUCCAACCUCACUCCAUAUUUUACUCCAAAAUUGAGAAAAUGGAGUGG AAAU GAGU AUGAA AAAAAAUAAAAG AUUACUC   U
  ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||| |||||||||||| |||||||
  AGAGGUUGGAGUGAGGUAUAAAAUGAGGUUUUAACUCUUUUACCUUACC UUUA CUCA UACUU UUUUUUAUUUUC UAAUGAG   U
GU                                                 C    C    A     A            G       AUA
Stem-loop sequence UCUCCAACCUCACUCCAUAUUUUACUCCAAAAUUGAGAAAAUGGAGUGGAAAAUAGAGUAAUGAACAAAAAAUAAAAGGAUUACUCCAUUUAUAGAGUAAUGCUUUUAUUUUUUAUUCAUAACUCCAUUUCCCAUUCCAUUUUCUCAAUUUUGGAGUAAAAUAUGGAGUGAGGUUGGAGAUG