Search result

BaseInfo

ncRNA ID	ath_circ_000871
Species	Arabidopsis thaliana
Class	circRNA
Genome position	1:2697015-2700413[+]
Reference genome	TAIR10
Source	PlantcircBase
Method	NA
Type	exonic
Splice junction sequence	GAAGGCATAAAAACTGCTCTTTTACTTGGCGCGGTTGATCGTGAAATCGGAGGGATTGCCATTTCAGGTCGTAGAGGCACTGCAAAAACAGTCATGGCGCTGCGATAACCGATGGTCGAGCCAACATTACACTGAAAAGATCAACTGATCCGGAGTCTATTGCCCCAGATGCTCCTAGACCCACGTCCAAAGAATTGAAG
Tissues	whole_plant
Exon boundary	Yes-Yes
Splicing signals	AG-GT
circRNA sequence	NA
Genomic sequence	GAAGGCATAAAAACTGCTCTTTTACTTGGCGCGGTTGATCGTGAAATCGGAGGGATTGCCATTTCAGGTCGTAGAGGCACTGCAAAAACAGTCATGGCGCGAGGGCTTCATGAAATCCTCCCTCCTATTGAAGTTGTTGTAGGCTCAATATCAAATGCTGACCCAGCTTGTCCAGATGAGTAAGATTCTTACAATCTGAGAAAGAAATTGCTTTTCTTCTTCTTTTAATTCTTACACTGTTGGCTTGTACCTTTTGTGATATATGTAGGTGGGAAGATGACTTAGATGAGCGCATAGAGTACAATGCTGACAATACCATTAAGACTGAGATTGTCAAATCTCCTTTCATTCAGGTACATTTAGTTTTAGGAGGCATTACAATTTTTCTGAAATTGTTTTTCTTTTTACTTAGGTTTTCCTGTCGTTTATGTCACACAGATTCCACTAGGAGTTACAGAAGACAGACTCATTGGGTCTGTTGATGTTGAGGAGTCTGTGAAAAGGGGGACAACTGTTTTCCAACCTGGTCTTTTGGCTGAAGCCCATAGAGGAGTGTTGTATGTTGATGAAATAAATCTCTTAGATGAGGGAATTAGTAATTTGCTTCTCAATGTATTGACGGATGGTGTTAATATAGTTGAAAGAGAAGGAATCAGCTTTAGGCACCCGTGCAAACCACTTTTAATTGCAACCTATAACCCTGAAGAAGGTGCTGTTCGAGAGCACTTGCTAGACCGTGTTGCCATTAATTTAAGGTACTACTGGAGTTTATAAATCAAGTGTGATAAATATTGCCTGTTTCTTTTGGGTAATTCCCATTTCTTTCTCTTTTTACATCACGATGTTAACCTTTGCAGTGCAGACCTACCTATGAGTTTTGAAGATCGTGTCGCAGCAGTTGGAATTGCCACACAGTTTCAGGAACGCTGTAATGAGGTTTTTAGAATGGTAAATGAAGAGACAGAAACAGCAAAGACGCAGGTATCTTCAAATGAATTAAGAAAAAAAGGGCCTCATTAGTAAAAATTTGATGGGATGCTATGCTTCTCATCCCACTTTTCTCGATCATAATCCAGTGCATTTTCTCTGACTTTAGATTATATTGGCTAGAGAATATTTGAAAGATGTCAAGATAAGTAGAGAGCAATTGAAGTATCTGGTTTTGGAAGCTGTCCGAGGTGGTGTCCAGGTATTGAGCAAAAATTCTGAAGTAATTTTTTGTTAATGGAAGAAATACACTTAGTAACATATTCCTGGAAGAAAAAGGATAAACACGAAAAGAAAGGACAAGATGCATGCAATGATGCAACATAATGTCACGATTATAGACTTCAACTAGTATAGGGCTCAAGAAATGGCTCACCACAGGCAGAAAGATACATCTAGATAGAGTTGTTTTGATTTAGAAACAACGCTGGAAAAAGAAGGGCCTGGCATCAAATGCTTTTGTTGCGCTGTTGATTGTAATATTTCACCAAGTTATGATCATATCACTATAGTTATATTTCTGCGTTTGGTTTACTTGGTAGTTACTTCTCATGGCGTATCTTTTGTCGATGATTACCTGGAATCGTTTAATACTCCTTTCCCAAATAACAAATTTATGATACAGGGACACCGCGCCGAATTGTATGCAGCTCGTGTGGCGAAGTGTTTAGCTGCAATTGAAGGACGAGAAAAAGTCACAATCGATGACCTCAGAAAGGCCGTAAGTACTCTTCTCTAGCTCATTCATTTTTGTTTTCTTTCCCAGAACGATCAAGCAAGTCATAAACTTATAGAATTAGTCATCCTACGTTTACTTTCACTTTCCTTGTATTGTCTTTGTCTATAATTGAACATCTTAATAGAAATTTTTGATTAGCAATGTAGAATGACGCTCTATAATGATTTGGATGGAGTATTTATGATATCCTCTAGTTATTGATTAGCAAATGTGGTCCATTTTTTCAATAGGTTGAGCTGGTCATTCTTCCTCGTTCATCACTAGATGAGACTCCACCTGAACAACAAAACCAACCACCACCTCCTCCACCTCCTCCACAAAATAGCGAATCTGGAGAAGAAGAAAATGAAGAAGAACAAGAAGAAGAAGAAGAGGTCAGTGGATGCAGTACACATTATTCTCTCGTTGAACACACGTTCAAGGTTCTAAAGTAGAAATCATTAACCAATGTAGGATGAAAGCAATGAAGAAAATGAAAATGAGCAGCAACAGGACCAAATACCTGAAGAGTTTATATTTGACGCTGAGGGCGGTCTGGTGGATGAGAAACTCCTCTTCTTTGCTCAACAAGCCCAGAAACGTCGGGGGAAAGCTGGCAGGGCGAAGAATGTCATATTCTCAGAAGATAGAGGACGCTACATAAAGCCAATGCTTCCAAAGGTTTGCCCTTAACAAATTCTCAGGCTCCCAAACATGCATAGTCCTTAACAAATTTTACTTTGATAGGGTCCAGTAAAAAGATTAGCTGTGGATGCAACCCTTAGAGCAGCTGCACCATACCAGAAATTGCGCAGAGAGAAGGATATCTCAGGAACTAGGAAAGTCTTTGTTGAGAAGACAGATATGAGGGCCAAAAGAATGGCAAGGAAAGCTGGAGCCCTGGTACTGAACCTTGTCCATACATTCTTCTAAAAGATTGTATATAAACAGTTTCCTTGATACAACATTATTCTCACTTTATACTTTAAACAGATGTTTGGCATGATAAATTTGACAGTTTCCTTGACACAAGCTTCAGTGAAAACATAGATAATATCTGATTACGCTTCTGTTTACCATTGTTGTATGGCAGGTTATCTTTGTGGTTGATGCAAGTGGCAGTATGGCATTGAATCGTATGCAAAACGCCAAAGGTGCTGCACTCAAACTACTGGCAGAGAGCTATACTAGCAGGGATCAGGTAAAGGTTACTTTTTTTGAATAGTTAACGTGCTTGTTGCTAGTTTGGATGAATTCATTGGGCCTTCGGATGAGACTCAATACACCAGTAATTGGTTTAGGTTTCGATTATTCCTTTCCGAGGGGATGCTGCGGAAGTGCTCTTGCCCCCTTCTAGATCAATAGCAATGGCAAGGAATCGTCTTGAGAGACTTCCTTGTGGTGGTGGTTCTCCTCTTGCCCATGGTTTAACAACGGTATGTCAAATATTATGGTGTTGTTAGTAAGATAACTGCTAGTATCGACTAAATTGTGGGTCAGCATAATCGTAACAGTAACAACTATATTCATATCAGGCTGTAAGAGTAGGACTTAACGCAGAGAAGAGTGGTGATGTCGGGCGCATAATGATTGTTGCGATAACCGATGGTCGAGCCAACATTACACTGAAAAGATCAACTGATCCGGAGTCTATTGCCCCAGATGCTCCTAGACCCACGTCCAAAGAATTGAAG