| ncRNA ID | novel_bra_miR160 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA3:15829814-15829974 [+] |
| Reference genome | Brapa_1.0 |
| Source | SRR1592475 |
| Length | 24 |
| Mature sequence(if miRNA) | 138 - AAAUUAUAGAGUGGGGAUGGAGAU - 161 |
| Stem-loop(if miRNA) |
-- A C C AUA - CAA ---- UC U CUUCAUCCCCAC C AUAAUUUACU CAAAA GAGUGAGAAAUGGAGUA UGAA AAAAUAAAAA AUU UCUA U |||||||||||| | |||||||||| ||||| ||||||||||||||||| |||| |||||||||| ||| |||| GAGGUAGGGGUG G UAUUAAAUGA GUUUU UUCACUUUUUACCUCAU ACUU UUUUGUUUUU UAA AGGU U UA A A C -AC C --- UCAC UA A |
| Stem-loop sequence | CUUCAUCCCCACACCAUAAUUUACUCCAAAAAUAGAGUGAGAAAUGGAGUAUGAACAAAAAAUAAAAAAUUUCUCUAUUUAUGGAAUAAUCACUUUUUUGUUUUUUCACUACUCCAUUUUUCACUUCAUUUUGCAGUAAAUUAUAGAGUGGGGAUGGAGAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_018655293.1 |
|
2.5 | PREDICTED: Brassica rapa 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase 1-like (LOC103845591), transcript variant X3, mRNA | NA | coding protein | psRNATarget |