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BaseInfo

ncRNA ID novel_bra_miR159
Species Brassica rapa
Class miRNA
Genome position ChrA3:8324377-8324542 [+]
Reference genome Brapa_1.0
Source SRR1160826
Length 24
Mature sequence(if miRNA) 143 - AGAGGCAUACAUUGGAGUAAAUCC - 166
Stem-loop(if miRNA) --                    G  A  A          A    A  U              AUU G       -C       A
  AUUUGCUCCAAUGUAUGCCU UA AA AGAGUUCCUC AUUU UA GGGAAAAUAUAGAG   U CUAUUUU  AUCUCUA A
  |||||||||||||||||||| || || |||||||||| |||| || ||||||||||||||   | |||||||  |||||||
  UAAAUGAGGUUACAUACGGA AU UU UCUCAAGGAG UAAA AU UCCUUUUAUAUCUC   A GAUGAAA  UGGAGAU U
CC                    G  A  A          A    -  U              CUU G       AA       A
Stem-loop sequence AUUUGCUCCAAUGUAUGCCUGUAAAAAAGAGUUCCUCAAUUUAUAUGGGAAAAUAUAGAGAUUUGCUAUUUUCAUCUCUAAAUAUAGAGGUAAAAAGUAGGAUUCCUCUAUAUUUUCCUUUAAAAUAGAGGAACUCUAUUAUAGAGGCAUACAUUGGAGUAAAUCC