ncRNA ID | novel_bra_miR158 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA2:4956766-4956836 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1592475;SRR1592478 |
Length | 24 |
Mature sequence(if miRNA) | 48 - AGAACGAGUCAGCUCUGGUGGUAA - 71 |
Stem-loop(if miRNA) |
--  AA      -     U      AA         G   AG  CGAGUC AGCUC GGUGGU  AGGAGUUGC G   ||  |||||| ||||| ||||||  |||||||||   UC  GCUUAG UUGGG CCACCG  UCUUCAAUG G GG  GC      C     C      --         C |
Stem-loop sequence | AGAACGAGUCAGCUCUGGUGGUAAAGGAGUUGCGGGCGUAACUUCUGCCACCCGGGUUCGAUUCGCGCUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009127893.1 |
|
2.0 | PREDICTED: Brassica rapa uncharacterized LOC103851065 (LOC103851065), mRNA | uncharacterized LOC103851065(LOC103851065) | coding protein | psRNATarget |