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BaseInfo

ncRNA ID	novel_bra_miR157
Species	Brassica rapa
Class	miRNA
Genome position	ChrA2:5310690-5310779 [-]
Reference genome	Brapa_1.0
Source	SRR1592475
Length	24
Mature sequence(if miRNA)	67 - AACUAAAAAAAGUAAGAACCGGUU - 90
Stem-loop(if miRNA)	--AAC      AA          GU    AAAUUAAC      U           UAAAAA  GUAAGAACCG  UCUU        GGUUUU AAAUAU      ||||||  ||||||||||  ||||        |||||| |||||U      AUUUUU  CAUUCUUGGC  AGAA        CCGAAA UUUAUU AAUUA      AC          UG    --------      -
Stem-loop sequence	AACUAAAAAAAGUAAGAACCGGUUCUUAAAUUAACGGUUUUUAAAUAUUUUAUUUAAAGCCAAGAGUCGGUUCUUACCAUUUUUAAUUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009123298.2	ncRNA:24   UUGGCCAAGAAUGAAAAAAAUCAA   1   *|*=|*||||*||||||||||||| targets:166   UAGUGCUUCUAACUUUUUUUAGUU   189 Target Full Sequence	2.0	PREDICTED: Brassica rapa E3 ubiquitin-protein ligase At3g02290 (LOC103846386), mRNA	E3 ubiquitin-protein ligase At3g02290(LOC103846386)	coding protein	psRNATarget
XM_009122101.2	ncRNA:24   UUG-GCCAAGAAUGAAAAAAAUCAA   1   |||-|**|||||||||||||||*|| targets:5956   AACACUCUUCUUACUUUUUUUACUU   5980 Target Full Sequence	2.5	PREDICTED: Brassica rapa E3 ubiquitin-protein ligase listerin (LOC103845267), mRNA	E3 ubiquitin-protein ligase listerin(LOC103845267)	coding protein	psRNATarget