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BaseInfo

ncRNA ID novel_bra_miR156
Species Brassica rapa
Class miRNA
Genome position ChrA2:5423516-5423567 [-]
Reference genome Brapa_1.0
Source SRR1592475;SRR1592477;SRR1592478;SRR1776796;SRR1776877;SRR1776880;SRR1776899;SRR1777714
Length 23
Mature sequence(if miRNA) 1 - AUAUGUAGAGAUUUUUGUUACUA - 23
Stem-loop(if miRNA) --  U       -   A    A    A
  GU ACAAAAA CUU UAUA AUAC U
  || ||||||| ||| |||| ||||
  CA UGUUUUU GAG AUGU UAUG A
AU  U       A   -    A    G
Stem-loop sequence GUUACAAAAACUUAUAUAAAUACAUAGGUAUAUGUAGAGAUUUUUGUUACUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009114564.2
ncRNA:23   AUCAUUGUUUUUAGAGAUGUAUA   1
  |||||||||||||||*|||||||
targets:713   UAGUAACAAAAAUCUAUACAUAU   735

1.5 PREDICTED: Brassica rapa defensin-like protein 35 (LOC103838141), mRNA defensin-like protein 35(LOC103838141) coding protein psRNATarget