ncRNA ID | novel_bra_miR156 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA2:5423516-5423567 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1592475;SRR1592477;SRR1592478;SRR1776796;SRR1776877;SRR1776880;SRR1776899;SRR1777714 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AUAUGUAGAGAUUUUUGUUACUA - 23 |
Stem-loop(if miRNA) |
--  U       -   A    A    A   GU ACAAAAA CUU UAUA AUAC U   || ||||||| ||| |||| ||||   CA UGUUUUU GAG AUGU UAUG A AU  U       A   -    A    G |
Stem-loop sequence | GUUACAAAAACUUAUAUAAAUACAUAGGUAUAUGUAGAGAUUUUUGUUACUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009114564.2 |
|
1.5 | PREDICTED: Brassica rapa defensin-like protein 35 (LOC103838141), mRNA | defensin-like protein 35(LOC103838141) | coding protein | psRNATarget |