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BaseInfo

ncRNA ID novel_bra_miR151
Species Brassica rapa
Class miRNA
Genome position ChrA2:6347934-6348112 [+]
Reference genome Brapa_1.0
Source SRR1592475
Length 24
Mature sequence(if miRNA) 156 - AUAGAGGCAUACAUUAGAGCAAAU - 179
Stem-loop(if miRNA) --      C      AA   A             C       ----------------                  AUUUA       -C       A
  UUGCUC AAUGUA  CCU UAUAAUAGAGUUC UCUAUUU                AUAGGGAAAAAUAUAGAA     CUAUUUU  AUCUCUA A
  |||||| ||||||  ||| ||||||||||||| |||||||                ||||||||||||||||||     |||||||  |||||||
  AACGAG UUACAU  GGA AUAUUAUCUUAAG AGAUAAA                UAUCUCUUUUUAUAUCUU     GAUGAAA  UGGAGAU U
UA      A      AC   G             A       AUCUCCUUUUAUAUCU                  CUUAG       AA       A
Stem-loop sequence UUGCUCCAAUGUAAACCUAUAUAAUAGAGUUCCUCUAUUUAUAGGGAAAAAUAUAGAAAUUUACUAUUUUCAUCUCUAAAUAUAGAGGUAAAAAGUAGGAUUCUUCUAUAUUUUUCUCUAUUCUAUAUUUUCCUCUAAAAUAGAAGAAUUCUAUUAUAGAGGCAUACAUUAGAGCAAAU