ncRNA ID | novel_bra_miR151 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA2:6347934-6348112 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1592475 |
Length | 24 |
Mature sequence(if miRNA) | 156 - AUAGAGGCAUACAUUAGAGCAAAU - 179 |
Stem-loop(if miRNA) |
--      C      AA   A             C       ----------------                  AUUUA       -C       A   UUGCUC AAUGUA  CCU UAUAAUAGAGUUC UCUAUUU                AUAGGGAAAAAUAUAGAA     CUAUUUU  AUCUCUA A   |||||| ||||||  ||| ||||||||||||| |||||||                ||||||||||||||||||     |||||||  |||||||   AACGAG UUACAU  GGA AUAUUAUCUUAAG AGAUAAA                UAUCUCUUUUUAUAUCUU     GAUGAAA  UGGAGAU U UA      A      AC   G             A       AUCUCCUUUUAUAUCU                  CUUAG       AA       A |
Stem-loop sequence | UUGCUCCAAUGUAAACCUAUAUAAUAGAGUUCCUCUAUUUAUAGGGAAAAAUAUAGAAAUUUACUAUUUUCAUCUCUAAAUAUAGAGGUAAAAAGUAGGAUUCUUCUAUAUUUUUCUCUAUUCUAUAUUUUCCUCUAAAAUAGAAGAAUUCUAUUAUAGAGGCAUACAUUAGAGCAAAU |