ncRNA ID | novel_bra_miR149 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA2:18382974-18383128 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1592475;SRR1592478;SRR1776796;SRR1776880;SRR1776889;SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACUGGAUUUUUAGUUGAGGGUUUU - 24 |
Stem-loop(if miRNA) |
--      U          A   U  A                 UAGUU                    CC   UAAA   AACCCU CAACUAAAAA UCC GU AAAUAAACCCUCAACUU     CCGUUAACAUAUGUUACCCU  GUC    A   |||||| |||||||||| ||| || |||||||||||||||||     ||||||||||||||||||||  |||    A   UUGGGA GUUGAUUUUU AGG CA UUUAUUUGGGAGUUGAA     GGCAAUUGUAUACAGUGGGA  CAG    A UU      -          -   U  C                 UAUUU                    AA   UGCC |
Stem-loop sequence | AACCCUUCAACUAAAAAAUCCUGUAAAAUAAACCCUCAACUUUAGUUCCGUUAACAUAUGUUACCCUCCGUCUAAAAAACCGUGACAAAGGGUGACAUAUGUUAACGGUUUAUAAGUUGAGGGUUUAUUUCACUGGAUUUUUAGUUGAGGGUUUU |