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BaseInfo

ncRNA ID novel_bra_miR149
Species Brassica rapa
Class miRNA
Genome position ChrA2:18382974-18383128 [-]
Reference genome Brapa_1.0
Source SRR1592475;SRR1592478;SRR1776796;SRR1776880;SRR1776889;SRR1777714
Length 24
Mature sequence(if miRNA) 1 - ACUGGAUUUUUAGUUGAGGGUUUU - 24
Stem-loop(if miRNA) --      U          A   U  A                 UAGUU                    CC   UAAA
  AACCCU CAACUAAAAA UCC GU AAAUAAACCCUCAACUU     CCGUUAACAUAUGUUACCCU  GUC    A
  |||||| |||||||||| ||| || |||||||||||||||||     ||||||||||||||||||||  |||    A
  UUGGGA GUUGAUUUUU AGG CA UUUAUUUGGGAGUUGAA     GGCAAUUGUAUACAGUGGGA  CAG    A
UU      -          -   U  C                 UAUUU                    AA   UGCC
Stem-loop sequence AACCCUUCAACUAAAAAAUCCUGUAAAAUAAACCCUCAACUUUAGUUCCGUUAACAUAUGUUACCCUCCGUCUAAAAAACCGUGACAAAGGGUGACAUAUGUUAACGGUUUAUAAGUUGAGGGUUUAUUUCACUGGAUUUUUAGUUGAGGGUUUU