ncRNA ID | novel_bra_miR147 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA10:17200531-17200589 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1592475;SRR1592477;SRR1592478;SRR1776877;SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 36 - AAAACUGUGUAACCAAUUAGAUGU - 59 |
Stem-loop(if miRNA) |
--    CU  G          G   UUAU   AAAA  GU UAACCAAUUA AUG    A   ||||  || |||||||||| |||    G   UUUU  UA GUUGGUUAAU UAU    U AU    AG  A          G   UUAC |
Stem-loop sequence | AAAACUGUGUAACCAAUUAGAUGUUAUAGUCAUUUAUGUAAUUGGUUGAAUGAUUUUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009145191.2 |
|
3.0 | PREDICTED: Brassica rapa uncharacterized LOC103867153 (LOC103867153), mRNA | uncharacterized LOC103867153(LOC103867153) | coding protein | psRNATarget |