ncRNA ID | novel_bra_miR143 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA3:19161797-19161897 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1160826;SRR1161445 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGAAGCUGCCAGCAUGAUCUA - 21 |
Stem-loop(if miRNA) |
--         C             UA  -     UU ---         UA   UGAAGCUGC AGCAUGAUCUAGU  AC UUUAU  C   UCCGUUGUU  U   ||||||||| |||||||||||||  || |||||  |   |||||||||  C   ACUUUGAUG UUGUACUAGAUUA  UG GAAUA  G   AGGUAACAG  C CC         C             GC  U     GG AAA         UA |
Stem-loop sequence | UGAAGCUGCCAGCAUGAUCUAGUUAACUUUAUUUCUCCGUUGUUUAUCCAUGACAAUGGAAAAGGGAUAAGUGUCGAUUAGAUCAUGUUCGUAGUUUCACC |