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BaseInfo

ncRNA ID novel_bra_miR143
Species Brassica rapa
Class miRNA
Genome position ChrA3:19161797-19161897 [+]
Reference genome Brapa_1.0
Source SRR1160826;SRR1161445
Length 21
Mature sequence(if miRNA) 1 - UGAAGCUGCCAGCAUGAUCUA - 21
Stem-loop(if miRNA) --         C             UA  -     UU ---         UA
  UGAAGCUGC AGCAUGAUCUAGU  AC UUUAU  C   UCCGUUGUU  U
  ||||||||| |||||||||||||  || |||||  |   |||||||||  C
  ACUUUGAUG UUGUACUAGAUUA  UG GAAUA  G   AGGUAACAG  C
CC         C             GC  U     GG AAA         UA
Stem-loop sequence UGAAGCUGCCAGCAUGAUCUAGUUAACUUUAUUUCUCCGUUGUUUAUCCAUGACAAUGGAAAAGGGAUAAGUGUCGAUUAGAUCAUGUUCGUAGUUUCACC