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BaseInfo

ncRNA ID novel_bra_miR140
Species Brassica rapa
Class miRNA
Genome position ChrA2:353823-353957 [-]
Reference genome Brapa_1.0
Source SRR1485289
Length 24
Mature sequence(if miRNA) 112 - CCCUAAAUCUUGAAUCCCAAACCC - 135
Stem-loop(if miRNA) --        CU     C C       UGACU       UG      G   A    UUA      ---   C
  CCCUAAAU  UGAAU C AAACCCU     GUUUUAG  UUUAGG UUU GGGU   GAAUUU   AUC A
  ||||||||  ||||| | |||||||     |||||||  |||||| ||| ||||   ||||||   |||
  GGGAUUUA  AUUUA G UUUGGGA     UAAGAUU  AAAUUU AGA CCCA   UUUGAG   UGG A
UU        AG     A A       ---UU       UG      G   A    ---      AUU   G
Stem-loop sequence CCCUAAAUCUUGAAUCCCAAACCCUUGACUGUUUUAGUGUUUAGGGUUUAGGGUUUAGAAUUUAUCCAAGGGUUUAGAGUUUACCCAAGAGUUUAAAGUUUAGAAUUUAGGGUUUAGAAUUUAGAAUUUAGGGUU