ncRNA ID | novel_bra_miR139 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA2:3170540-3170723 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485289 |
Length | 24 |
Mature sequence(if miRNA) | 161 - AGAUUUGCUCCAAUGGUUCACUCU - 184 |
Stem-loop(if miRNA) |
--                                                            AUAU   UGUUUUUUCACUCUAUAUUUGGAG   AGAUUUGCUCCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGA    UCU                        U   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||                        A   UCUAAACGAGGUUACCAAGUGAGAUAUUAUCUCAAUGAGAUAUUAUCUCACUUUAUAUCU    UGA                        A AA                                                            ---C   CUUUAUAUCUCAUUAGAAUAAAAA |
Stem-loop sequence | AGAUUUGCUCCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGAAUAUUCUUGUUUUUUCACUCUAUAUUUGGAGUAAAAAAAUAAGAUUACUCUAUAUUUCAGUCUCUAUAUUUCACUCUAUUAUAGAGUAACUCUAUUAUAGAGUGAACCAUUGGAGCAAAUCUAA |