Search result

BaseInfo

ncRNA ID novel_bra_miR139
Species Brassica rapa
Class miRNA
Genome position ChrA2:3170540-3170723 [-]
Reference genome Brapa_1.0
Source SRR1485289
Length 24
Mature sequence(if miRNA) 161 - AGAUUUGCUCCAAUGGUUCACUCU - 184
Stem-loop(if miRNA) --                                                            AUAU   UGUUUUUUCACUCUAUAUUUGGAG
  AGAUUUGCUCCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGA    UCU                        U
  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||                        A
  UCUAAACGAGGUUACCAAGUGAGAUAUUAUCUCAAUGAGAUAUUAUCUCACUUUAUAUCU    UGA                        A
AA                                                            ---C   CUUUAUAUCUCAUUAGAAUAAAAA
Stem-loop sequence AGAUUUGCUCCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGAAUAUUCUUGUUUUUUCACUCUAUAUUUGGAGUAAAAAAAUAAGAUUACUCUAUAUUUCAGUCUCUAUAUUUCACUCUAUUAUAGAGUAACUCUAUUAUAGAGUGAACCAUUGGAGCAAAUCUAA